Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Gm16259-201ENSMUST00000145241 553 ntBASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Gm25389-201ENSMUST00000157340 286 ntBASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Gm23250-201ENSMUST00000157444 267 ntBASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Gm24931-201ENSMUST00000158324 107 ntBASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Gm3307-201ENSMUST00000176164 632 ntBASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Gm16378-201ENSMUST00000179168 342 ntBASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Gm6137-201ENSMUST00000187552 578 ntBASIC4.71□□□□□ -1.66
Lima1Q9ERG0 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Gm43408-201ENSMUST00000198263 440 ntBASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Gm45276-201ENSMUST00000209549 1086 ntBASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Gm19256-201ENSMUST00000218550 231 ntBASIC4.71□□□□□ -1.66
Lima1Q9ERG0 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Gm6474-201ENSMUST00000223250 699 ntBASIC4.71□□□□□ -1.66
Lima1Q9ERG0 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.71□□□□□ -1.66
Lima1Q9ERG0 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Fus-202ENSMUST00000079045 2623 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Gm25419-201ENSMUST00000104215 191 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 H3f3c-201ENSMUST00000119459 411 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Gm12041-201ENSMUST00000121606 602 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Gm13232-201ENSMUST00000121816 632 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Gm5401-201ENSMUST00000122444 365 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Trbv10-201ENSMUST00000168322 289 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Gm5777-201ENSMUST00000177265 448 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Gm37884-201ENSMUST00000191857 818 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Gm37072-201ENSMUST00000194570 837 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Gm44779-201ENSMUST00000206937 708 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Gm45660-201ENSMUST00000210267 151 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Gm2099-201ENSMUST00000220979 412 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 AC132446.1-201ENSMUST00000222655 226 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 AC153153.2-201ENSMUST00000223572 411 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Zfp429-203ENSMUST00000224684 524 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Gm24166-201ENSMUST00000082724 135 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Lima1Q9ERG0 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm11550-201ENSMUST00000118210 699 ntBASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm14861-201ENSMUST00000119451 455 ntBASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm14957-201ENSMUST00000121069 817 ntBASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm13132-201ENSMUST00000121194 472 ntBASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm22343-201ENSMUST00000122648 286 ntBASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms