Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Gm28594-201ENSMUST00000187022 661 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Gm28996-201ENSMUST00000190316 721 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Gm18444-201ENSMUST00000191239 629 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Gm37219-201ENSMUST00000192036 926 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Gm42428-201ENSMUST00000198677 302 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Gm45710-201ENSMUST00000212847 215 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 AL935138.1-201ENSMUST00000215309 196 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Gm19134-201ENSMUST00000221203 487 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 AC156559.2-201ENSMUST00000224403 384 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 AC131029.2-201ENSMUST00000226696 628 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 AC110380.1-201ENSMUST00000226987 389 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Mir463-201ENSMUST00000093570 75 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim8Q99PJ2 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm22019-201ENSMUST00000104359 96 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm24374-201ENSMUST00000104394 106 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm25315-201ENSMUST00000116823 121 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm8424-201ENSMUST00000117716 988 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm12667-201ENSMUST00000118299 1332 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm13835-201ENSMUST00000118459 685 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm11902-201ENSMUST00000118849 270 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm11357-201ENSMUST00000119758 954 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm9001-201ENSMUST00000121642 399 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm11679-201ENSMUST00000121830 779 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm25826-201ENSMUST00000157090 137 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm25387-201ENSMUST00000157813 132 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm10410-201ENSMUST00000180138 384 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm21399-201ENSMUST00000180210 597 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm26898-201ENSMUST00000181678 384 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Mir6238-201ENSMUST00000184140 129 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm19224-201ENSMUST00000190477 793 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm8939-201ENSMUST00000192577 964 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm43148-201ENSMUST00000198237 520 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm43431-201ENSMUST00000198577 340 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Trav15d-3-201ENSMUST00000198604 167 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm38395-201ENSMUST00000199904 830 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm43487-201ENSMUST00000200331 1031 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm8930-201ENSMUST00000201693 768 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm44219-201ENSMUST00000203005 273 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm18716-201ENSMUST00000204507 1603 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm45082-201ENSMUST00000206082 601 ntBASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim8Q99PJ2 Gm8523-201ENSMUST00000211386 552 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms