Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Gm26098-201ENSMUST00000157247 288 ntBASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Gm22819-201ENSMUST00000157445 303 ntBASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Gm36986-201ENSMUST00000195320 353 ntBASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.85□□□□□ -1.63
Trub1Q8C0D0 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trub1Q8C0D0 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Trub1Q8C0D0 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Gm42955-201ENSMUST00000197355 3393 ntBASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Gm23193-201ENSMUST00000102427 82 ntBASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Gm4342-201ENSMUST00000118982 367 ntBASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Gm22870-201ENSMUST00000157501 112 ntBASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Gm17152-201ENSMUST00000172430 535 ntBASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Gm20428-201ENSMUST00000174365 283 ntBASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Gm9457-201ENSMUST00000180176 372 ntBASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Gm29332-201ENSMUST00000190829 227 ntBASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Gm37636-201ENSMUST00000193583 359 ntBASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Gm43350-201ENSMUST00000196382 711 ntBASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Gm43724-201ENSMUST00000197516 226 ntBASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Gm43919-201ENSMUST00000204303 364 ntBASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.84□□□□□ -1.63
Trub1Q8C0D0 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Trub1Q8C0D0 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Mir342-201ENSMUST00000083502 99 ntBASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Trub1Q8C0D0 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Trub1Q8C0D0 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.84□□□□□ -1.64
Trub1Q8C0D0 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
Trub1Q8C0D0 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Gm13214-201ENSMUST00000122137 408 ntBASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Gm26347-201ENSMUST00000157526 131 ntBASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Gm24217-201ENSMUST00000158260 133 ntBASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Gm15838-201ENSMUST00000161575 180 ntBASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Gm18953-201ENSMUST00000175694 300 ntBASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms