Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm15058-201ENSMUST00000117689 458 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 Gm14220-201ENSMUST00000118114 449 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 Gm11490-201ENSMUST00000118128 272 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 Rpl21-ps15-201ENSMUST00000121545 483 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 Gm24630-201ENSMUST00000122768 106 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 Kbtbd8os-201ENSMUST00000135145 427 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim35Q8C006 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC8.09□□□□□ -1.11
Trim35Q8C006 Gm24965-201ENSMUST00000157922 106 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 Gm16232-201ENSMUST00000162856 167 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 Gm24100-201ENSMUST00000178592 79 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 Gm24137-201ENSMUST00000180055 79 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 Gm22391-201ENSMUST00000180356 79 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 Mir7060-201ENSMUST00000183486 137 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC8.09□□□□□ -1.11
Trim35Q8C006 Gm43247-201ENSMUST00000198638 481 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 Klk1b14-ps-201ENSMUST00000206059 777 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 Gm5654-201ENSMUST00000217787 475 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 Gm18502-201ENSMUST00000218679 199 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim35Q8C006 AC165092.2-201ENSMUST00000224681 368 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 AC160980.2-201ENSMUST00000225131 949 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC8.09□□□□□ -1.11
Trim35Q8C006 AC165415.1-201ENSMUST00000228924 273 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Trim35Q8C006 Rpl21-ps7-201ENSMUST00000077420 483 ntBASIC8.09□□□□□ -1.11
Trim35Q8C006 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim35Q8C006 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim35Q8C006 Supt20-202ENSMUST00000170552 1968 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim35Q8C006 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim35Q8C006 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Trim35Q8C006 Lrrc1-201ENSMUST00000113421 2630 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim35Q8C006 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Trim35Q8C006 Zfp82-207ENSMUST00000183190 1906 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim35Q8C006 Eftud2-201ENSMUST00000021306 3324 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Trim35Q8C006 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim35Q8C006 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim35Q8C006 Aldoart1-202ENSMUST00000179234 2050 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Trim35Q8C006 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim35Q8C006 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Trim35Q8C006 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm9429-201ENSMUST00000117804 868 ntBASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm13879-201ENSMUST00000118308 242 ntBASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm13541-201ENSMUST00000119519 283 ntBASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm26479-201ENSMUST00000122620 106 ntBASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm16008-201ENSMUST00000126009 810 ntTSL 3 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm16159-201ENSMUST00000126122 947 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm24191-201ENSMUST00000157977 122 ntBASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm17186-201ENSMUST00000171742 456 ntBASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm24307-201ENSMUST00000178512 101 ntBASIC8.08□□□□□ -1.12
Trim35Q8C006 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Mir691-201ENSMUST00000199719 78 ntBASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm44473-201ENSMUST00000204039 152 ntBASIC8.08□□□□□ -1.12
Trim35Q8C006 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim35Q8C006 AC153961.2-201ENSMUST00000218877 164 ntBASIC8.08□□□□□ -1.12
Trim35Q8C006 AC166358.1-201ENSMUST00000220677 105 ntBASIC8.08□□□□□ -1.12
Trim35Q8C006 AC153662.2-201ENSMUST00000221097 120 ntBASIC8.08□□□□□ -1.12
Trim35Q8C006 AC156037.2-201ENSMUST00000221284 112 ntBASIC8.08□□□□□ -1.12
Trim35Q8C006 AC166341.6-201ENSMUST00000221528 105 ntBASIC8.08□□□□□ -1.12
Trim35Q8C006 CT030242.1-201ENSMUST00000221945 125 ntBASIC8.08□□□□□ -1.12
Trim35Q8C006 AC153663.1-201ENSMUST00000222165 120 ntBASIC8.08□□□□□ -1.12
Trim35Q8C006 CT030157.1-201ENSMUST00000222355 148 ntBASIC8.08□□□□□ -1.12
Trim35Q8C006 AC150661.2-201ENSMUST00000222418 105 ntBASIC8.08□□□□□ -1.12
Trim35Q8C006 AC127242.2-201ENSMUST00000223138 148 ntBASIC8.08□□□□□ -1.12
Trim35Q8C006 Ly6f-201ENSMUST00000023247 877 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Zfp473-201ENSMUST00000060270 3800 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Tarm1-201ENSMUST00000065703 892 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Mir302d-201ENSMUST00000083513 66 ntBASIC8.08□□□□□ -1.12
Trim35Q8C006 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim35Q8C006 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms