Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm43882-201ENSMUST00000204871 2264 ntBASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Gm7206-201ENSMUST00000117730 508 ntBASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Gm22596-201ENSMUST00000157601 316 ntBASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Gm7609-204ENSMUST00000161424 461 ntBASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Gm27985-201ENSMUST00000185112 378 ntBASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Gm5995-201ENSMUST00000204107 1273 ntBASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Thoc7-209ENSMUST00000225325 765 ntBASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 AC121912.1-201ENSMUST00000227525 1201 ntBASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Gm10794-201ENSMUST00000099624 207 ntBASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Gm15166-201ENSMUST00000120790 385 ntBASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Gm24395-201ENSMUST00000158139 125 ntBASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Gm24216-201ENSMUST00000158259 117 ntBASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Dlx6os1-204ENSMUST00000184182 146 ntBASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Gm29556-201ENSMUST00000187591 696 ntBASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Gm10048-201ENSMUST00000194196 372 ntBASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Gm6261-201ENSMUST00000204707 760 ntBASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 AC173345.3-201ENSMUST00000221245 1093 ntBASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Gm2645-201ENSMUST00000223516 547 ntBASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Gm24763-201ENSMUST00000083688 190 ntBASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Gm10997-201ENSMUST00000210294 1500 ntBASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
Ccdc40Q8BI79 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm15772-201ENSMUST00000118533 438 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm7657-201ENSMUST00000118851 666 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm12379-201ENSMUST00000119607 391 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm11481-201ENSMUST00000120069 255 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm25106-201ENSMUST00000122672 134 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm26925-201ENSMUST00000182470 957 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm28429-201ENSMUST00000188521 363 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm9173-201ENSMUST00000198054 400 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm43215-201ENSMUST00000199108 252 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm43554-201ENSMUST00000199987 186 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 AC122464.1-201ENSMUST00000202789 770 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm17984-201ENSMUST00000205286 859 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm45026-201ENSMUST00000205292 833 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm18468-201ENSMUST00000207321 369 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm18470-201ENSMUST00000207467 420 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm18465-201ENSMUST00000207468 369 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm18464-201ENSMUST00000207803 420 ntBASIC5.25□□□□□ -1.57
Ccdc40Q8BI79 Gm18458-201ENSMUST00000207908 369 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms