Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Herc4Q6PAV2 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.35□□□□□ -1.55
Herc4Q6PAV2 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm14576-201ENSMUST00000118073 1111 ntBASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm25179-201ENSMUST00000122632 128 ntBASIC5.35□□□□□ -1.55
Herc4Q6PAV2 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm23327-201ENSMUST00000157420 78 ntBASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm26153-201ENSMUST00000157433 127 ntBASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm25714-201ENSMUST00000158626 296 ntBASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm17091-201ENSMUST00000163248 357 ntBASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Mir6374-201ENSMUST00000184003 107 ntBASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm5511-201ENSMUST00000189380 802 ntBASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm8480-201ENSMUST00000190350 698 ntBASIC5.35□□□□□ -1.55
Herc4Q6PAV2 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm43794-201ENSMUST00000200971 692 ntBASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm44431-201ENSMUST00000203500 413 ntBASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm18127-201ENSMUST00000208479 725 ntBASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.35□□□□□ -1.55
Herc4Q6PAV2 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Mir338-201ENSMUST00000083666 98 ntBASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.35□□□□□ -1.55
Herc4Q6PAV2 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Gm44286-201ENSMUST00000204098 1487 ntBASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Gm8145-201ENSMUST00000118220 745 ntBASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Gm14082-201ENSMUST00000118582 801 ntBASIC5.34□□□□□ -1.55
Herc4Q6PAV2 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Gm4134-201ENSMUST00000173244 563 ntBASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Gm42452-201ENSMUST00000199749 617 ntBASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Gm19189-201ENSMUST00000221689 754 ntBASIC5.34□□□□□ -1.55
Herc4Q6PAV2 AC154851.2-201ENSMUST00000222172 644 ntBASIC5.34□□□□□ -1.55
Herc4Q6PAV2 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Prl7a1-203ENSMUST00000224852 1283 ntBASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Herc4Q6PAV2 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.56
Herc4Q6PAV2 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Herc4Q6PAV2 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.34□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms