Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Usp49Q6P9L4 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.73□□□□□ -1.49
Usp49Q6P9L4 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Usp49Q6P9L4 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usp49Q6P9L4 Gm44562-201ENSMUST00000207194 1347 ntBASIC5.73□□□□□ -1.49
Usp49Q6P9L4 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.73□□□□□ -1.49
Usp49Q6P9L4 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Klra14-ps-201ENSMUST00000119532 802 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm11797-201ENSMUST00000121336 754 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm12998-201ENSMUST00000122445 789 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm3160-201ENSMUST00000128343 607 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm23993-201ENSMUST00000157478 144 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm24002-201ENSMUST00000158456 104 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm3053-201ENSMUST00000161709 616 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm17075-201ENSMUST00000171924 670 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Mir6343-201ENSMUST00000183584 84 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm17981-201ENSMUST00000191109 739 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Mir703-201ENSMUST00000197105 109 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm43631-201ENSMUST00000202011 369 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm43093-201ENSMUST00000202439 1213 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm19233-201ENSMUST00000219772 936 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Mir129-2-201ENSMUST00000083577 90 ntBASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp49Q6P9L4 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.49
Usp49Q6P9L4 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.71□□□□□ -1.49
Usp49Q6P9L4 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.71□□□□□ -1.49
Usp49Q6P9L4 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Usp49Q6P9L4 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Usp49Q6P9L4 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.71□□□□□ -1.5
Usp49Q6P9L4 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Usp49Q6P9L4 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp49Q6P9L4 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Usp49Q6P9L4 Gm23692-201ENSMUST00000101881 160 ntBASIC5.71□□□□□ -1.5
Usp49Q6P9L4 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Usp49Q6P9L4 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC5.71□□□□□ -1.5
Usp49Q6P9L4 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Usp49Q6P9L4 Gm14610-201ENSMUST00000118358 966 ntBASIC5.71□□□□□ -1.5
Usp49Q6P9L4 Gm15357-201ENSMUST00000119160 285 ntBASIC5.71□□□□□ -1.5
Usp49Q6P9L4 Gm12587-201ENSMUST00000120180 427 ntBASIC5.71□□□□□ -1.5
Usp49Q6P9L4 Gm12734-201ENSMUST00000120228 948 ntBASIC5.71□□□□□ -1.5
Usp49Q6P9L4 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.71□□□□□ -1.5
Usp49Q6P9L4 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.71□□□□□ -1.5
Usp49Q6P9L4 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.71□□□□□ -1.5
Usp49Q6P9L4 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Usp49Q6P9L4 Gm23777-201ENSMUST00000158994 259 ntBASIC5.71□□□□□ -1.5
Usp49Q6P9L4 Gm16026-202ENSMUST00000159695 772 ntBASIC5.71□□□□□ -1.5
Usp49Q6P9L4 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC5.71□□□□□ -1.5
Usp49Q6P9L4 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms