Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Mir7072-201ENSMUST00000184542 60 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm3605-201ENSMUST00000185858 440 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm42465-201ENSMUST00000197036 492 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm43675-201ENSMUST00000199468 1184 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm46193-201ENSMUST00000219399 364 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 CT025552.2-201ENSMUST00000225497 317 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 AC170810.3-201ENSMUST00000226177 374 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 AC132112.1-201ENSMUST00000226354 505 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 AC166344.2-201ENSMUST00000226747 374 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 AC155314.1-201ENSMUST00000227624 508 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 AC109172.2-201ENSMUST00000228792 381 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Mir129-2-201ENSMUST00000083577 90 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm11372-201ENSMUST00000117348 570 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm7058-201ENSMUST00000119209 902 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm12115-201ENSMUST00000119969 447 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm25669-201ENSMUST00000157699 112 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm25387-201ENSMUST00000157813 132 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm17044-201ENSMUST00000168549 828 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm24418-201ENSMUST00000177597 79 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm24315-201ENSMUST00000177835 127 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm24639-201ENSMUST00000178518 79 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm23076-201ENSMUST00000179082 79 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm25077-201ENSMUST00000179157 79 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm27957-201ENSMUST00000184054 127 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm27653-201ENSMUST00000185037 136 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm18342-201ENSMUST00000186987 694 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm18447-201ENSMUST00000187501 307 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm2427-201ENSMUST00000189121 881 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm37996-201ENSMUST00000191859 367 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm37119-201ENSMUST00000195691 389 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm43559-201ENSMUST00000198755 466 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm7166-201ENSMUST00000199715 303 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm17994-201ENSMUST00000209260 533 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm45689-201ENSMUST00000210522 133 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Rybp-ps-201ENSMUST00000069489 681 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm24043-201ENSMUST00000083108 116 ntBASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sh3rf1Q69ZI1 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 128.9 ms