Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
Sox17Q61473 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
Sox17Q61473 Gm18853-201ENSMUST00000183629 3596 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Sox17Q61473 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sox17Q61473 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Sox17Q61473 Gm26377-201ENSMUST00000102184 108 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Sox17Q61473 Gm15779-201ENSMUST00000117470 412 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Gm13428-201ENSMUST00000117540 365 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Gm12007-201ENSMUST00000120978 597 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Sox17Q61473 Gm24840-201ENSMUST00000122603 147 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sox17Q61473 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sox17Q61473 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sox17Q61473 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.8□□□□□ -1.64
Sox17Q61473 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC4.8□□□□□ -1.64
Sox17Q61473 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sox17Q61473 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sox17Q61473 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sox17Q61473 Gm25413-201ENSMUST00000158544 312 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Gm16102-201ENSMUST00000160955 420 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Gm2325-201ENSMUST00000186637 581 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sox17Q61473 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC4.8□□□□□ -1.64
Sox17Q61473 Gm42522-201ENSMUST00000196071 255 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC4.8□□□□□ -1.64
Sox17Q61473 Gm5284-201ENSMUST00000199053 903 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Gm7890-201ENSMUST00000204877 601 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Gm44681-201ENSMUST00000208447 842 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sox17Q61473 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sox17Q61473 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC4.8□□□□□ -1.64
Sox17Q61473 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC4.8□□□□□ -1.64
Sox17Q61473 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sox17Q61473 Gm46103-201ENSMUST00000217614 341 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sox17Q61473 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC4.8□□□□□ -1.64
Sox17Q61473 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC4.8□□□□□ -1.64
Sox17Q61473 Gm46436-201ENSMUST00000221851 1294 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sox17Q61473 Gm2645-201ENSMUST00000223516 547 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 AC108945.1-201ENSMUST00000226477 94 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Vmn1r41-205ENSMUST00000227630 827 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Sox17Q61473 Mir338-201ENSMUST00000083666 98 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Sox17Q61473 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Sox17Q61473 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Sox17Q61473 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sox17Q61473 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sox17Q61473 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sox17Q61473 Gm44518-201ENSMUST00000208080 4370 ntBASIC4.8□□□□□ -1.64
Sox17Q61473 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sox17Q61473 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Sox17Q61473 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.79□□□□□ -1.64
Sox17Q61473 Gm37509-201ENSMUST00000194867 3169 ntBASIC4.79□□□□□ -1.64
Sox17Q61473 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Sox17Q61473 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.79□□□□□ -1.64
Sox17Q61473 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sox17Q61473 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Sox17Q61473 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Sox17Q61473 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Sox17Q61473 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Sox17Q61473 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sox17Q61473 Gm22266-201ENSMUST00000104011 138 ntBASIC4.79□□□□□ -1.64
Sox17Q61473 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Sox17Q61473 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
Sox17Q61473 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.79□□□□□ -1.64
Sox17Q61473 Gm12392-201ENSMUST00000118014 938 ntBASIC4.79□□□□□ -1.64
Sox17Q61473 Gm12287-201ENSMUST00000119770 707 ntBASIC4.79□□□□□ -1.64
Sox17Q61473 Gm14989-201ENSMUST00000120497 207 ntBASIC4.79□□□□□ -1.64
Sox17Q61473 n-R5s98-201ENSMUST00000122549 119 ntBASIC4.79□□□□□ -1.64
Sox17Q61473 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC4.79□□□□□ -1.64
Sox17Q61473 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Sox17Q61473 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC4.79□□□□□ -1.64
Sox17Q61473 Gm5699-201ENSMUST00000152491 723 ntBASIC4.79□□□□□ -1.64
Sox17Q61473 Gm22596-201ENSMUST00000157601 316 ntBASIC4.79□□□□□ -1.64
Sox17Q61473 Gm26404-201ENSMUST00000158498 109 ntBASIC4.79□□□□□ -1.64
Sox17Q61473 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sox17Q61473 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sox17Q61473 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Sox17Q61473 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Sox17Q61473 Gm22392-201ENSMUST00000177971 107 ntBASIC4.79□□□□□ -1.64
Sox17Q61473 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Sox17Q61473 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sox17Q61473 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sox17Q61473 Gm18843-201ENSMUST00000194982 719 ntBASIC4.79□□□□□ -1.64
Sox17Q61473 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC4.79□□□□□ -1.64
Sox17Q61473 Mir409-201ENSMUST00000198153 79 ntBASIC4.79□□□□□ -1.64
Sox17Q61473 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC4.79□□□□□ -1.64
Sox17Q61473 Gm42625-201ENSMUST00000198611 922 ntBASIC4.79□□□□□ -1.64
Sox17Q61473 Gm44360-201ENSMUST00000200081 82 ntBASIC4.79□□□□□ -1.64
Sox17Q61473 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC4.79□□□□□ -1.64
Sox17Q61473 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms