Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Shank3Q4ACU6 Dcdc5-202ENSMUST00000122388 4957 ntBASIC5.96□□□□□ -1.46
Shank3Q4ACU6 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Gm23789-201ENSMUST00000122536 301 ntBASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Gm27940-201ENSMUST00000184449 98 ntBASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Gm5284-201ENSMUST00000199053 903 ntBASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC5.95□□□□□ -1.46
Shank3Q4ACU6 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Gm23464-201ENSMUST00000083145 147 ntBASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Snora30-201ENSMUST00000083325 130 ntBASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Shank3Q4ACU6 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.95□□□□□ -1.46
Shank3Q4ACU6 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Mir7014-201ENSMUST00000183853 63 ntBASIC5.94□□□□□ -1.46
Shank3Q4ACU6 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Shank3Q4ACU6 n-R5s152-201ENSMUST00000093641 119 ntBASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Shank3Q4ACU6 AC122357.2-201ENSMUST00000220732 1525 ntBASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Shank3Q4ACU6 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Gm26300-201ENSMUST00000102282 94 ntBASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Gm14067-201ENSMUST00000119340 314 ntBASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Gm30280-201ENSMUST00000192214 262 ntBASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Shank3Q4ACU6 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.94□□□□□ -1.46
Shank3Q4ACU6 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Shank3Q4ACU6 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Gm8700-201ENSMUST00000222187 3054 ntBASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Amd-ps1-201ENSMUST00000120127 994 ntBASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Gm24774-201ENSMUST00000157384 134 ntBASIC5.93□□□□□ -1.46
Shank3Q4ACU6 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Gm8069-201ENSMUST00000197887 154 ntBASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Gm42999-201ENSMUST00000198049 786 ntBASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Gm45499-201ENSMUST00000211656 280 ntBASIC5.93□□□□□ -1.46
Shank3Q4ACU6 AC155266.1-201ENSMUST00000220762 904 ntBASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Shank3Q4ACU6 n-R5s7-201ENSMUST00000083755 121 ntBASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Gm26165-201ENSMUST00000083791 138 ntBASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Gm19368-201ENSMUST00000221258 4424 ntBASIC5.93□□□□□ -1.46
Shank3Q4ACU6 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Shank3Q4ACU6 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.92□□□□□ -1.46
Shank3Q4ACU6 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Shank3Q4ACU6 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.92□□□□□ -1.46
Shank3Q4ACU6 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Shank3Q4ACU6 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.92□□□□□ -1.46
Shank3Q4ACU6 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Shank3Q4ACU6 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Shank3Q4ACU6 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
Shank3Q4ACU6 Gm11485-201ENSMUST00000120048 1175 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms