Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Col17a1Q07563 Gm17952-201ENSMUST00000193914 747 ntBASIC7.85□□□□□ -1.15
Col17a1Q07563 Gm10048-201ENSMUST00000194196 372 ntBASIC7.85□□□□□ -1.15
Col17a1Q07563 Gm8023-201ENSMUST00000195298 903 ntBASIC7.85□□□□□ -1.15
Col17a1Q07563 Gm5660-201ENSMUST00000197453 1149 ntBASIC7.85□□□□□ -1.15
Col17a1Q07563 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC7.85□□□□□ -1.15
Col17a1Q07563 Gm45007-201ENSMUST00000206237 366 ntBASIC7.85□□□□□ -1.15
Col17a1Q07563 Gm45379-201ENSMUST00000211772 549 ntBASIC7.85□□□□□ -1.15
Col17a1Q07563 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Col17a1Q07563 Gm18487-201ENSMUST00000215826 878 ntBASIC7.85□□□□□ -1.15
Col17a1Q07563 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC7.85□□□□□ -1.15
Col17a1Q07563 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC7.85□□□□□ -1.15
Col17a1Q07563 AC154594.1-201ENSMUST00000225171 1273 ntBASIC7.85□□□□□ -1.15
Col17a1Q07563 AC174459.2-201ENSMUST00000226036 160 ntBASIC7.85□□□□□ -1.15
Col17a1Q07563 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Col17a1Q07563 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Col17a1Q07563 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Col17a1Q07563 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC7.85□□□□□ -1.15
Col17a1Q07563 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC7.84□□□□□ -1.15
Col17a1Q07563 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Col17a1Q07563 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col17a1Q07563 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC7.84□□□□□ -1.15
Col17a1Q07563 Gm42955-201ENSMUST00000197355 3393 ntBASIC7.84□□□□□ -1.15
Col17a1Q07563 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Col17a1Q07563 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col17a1Q07563 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC7.84□□□□□ -1.15
Col17a1Q07563 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Col17a1Q07563 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Col17a1Q07563 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col17a1Q07563 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Col17a1Q07563 Gm37834-201ENSMUST00000194517 3035 ntBASIC7.84□□□□□ -1.15
Col17a1Q07563 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC7.84□□□□□ -1.15
Col17a1Q07563 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC7.84□□□□□ -1.15
Col17a1Q07563 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC7.84□□□□□ -1.15
Col17a1Q07563 Gm13367-201ENSMUST00000119955 796 ntBASIC7.84□□□□□ -1.15
Col17a1Q07563 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC7.84□□□□□ -1.15
Col17a1Q07563 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC7.84□□□□□ -1.15
Col17a1Q07563 Gm4487-201ENSMUST00000150617 442 ntBASIC7.84□□□□□ -1.15
Col17a1Q07563 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Col17a1Q07563 Gm26828-201ENSMUST00000180640 172 ntBASIC7.84□□□□□ -1.15
Col17a1Q07563 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC7.84□□□□□ -1.15
Col17a1Q07563 Gm33571-201ENSMUST00000193271 657 ntBASIC7.84□□□□□ -1.15
Col17a1Q07563 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC7.84□□□□□ -1.15
Col17a1Q07563 Gm45240-201ENSMUST00000211437 674 ntBASIC7.84□□□□□ -1.15
Col17a1Q07563 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC7.84□□□□□ -1.15
Col17a1Q07563 AC159293.2-201ENSMUST00000222289 424 ntBASIC7.84□□□□□ -1.15
Col17a1Q07563 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col17a1Q07563 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC7.84□□□□□ -1.15
Col17a1Q07563 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC7.84□□□□□ -1.15
Col17a1Q07563 Gm43874-201ENSMUST00000204853 2798 ntBASIC7.84□□□□□ -1.15
Col17a1Q07563 Gm45061-201ENSMUST00000204395 2095 ntBASIC7.84□□□□□ -1.15
Col17a1Q07563 AC131743.1-201ENSMUST00000222138 4024 ntBASIC7.84□□□□□ -1.15
Col17a1Q07563 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col17a1Q07563 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
Col17a1Q07563 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Col17a1Q07563 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Col17a1Q07563 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Col17a1Q07563 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
Col17a1Q07563 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Col17a1Q07563 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
Col17a1Q07563 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
Col17a1Q07563 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col17a1Q07563 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Col17a1Q07563 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Col17a1Q07563 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col17a1Q07563 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Col17a1Q07563 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC7.83□□□□□ -1.16
Col17a1Q07563 Mir551b-201ENSMUST00000102165 98 ntBASIC7.83□□□□□ -1.16
Col17a1Q07563 Gm22590-201ENSMUST00000104247 128 ntBASIC7.83□□□□□ -1.16
Col17a1Q07563 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC7.83□□□□□ -1.16
Col17a1Q07563 Gm12748-201ENSMUST00000120763 504 ntBASIC7.83□□□□□ -1.16
Col17a1Q07563 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC7.83□□□□□ -1.16
Col17a1Q07563 Gm23354-201ENSMUST00000158426 104 ntBASIC7.83□□□□□ -1.16
Col17a1Q07563 Gm20773-201ENSMUST00000178940 681 ntBASIC7.83□□□□□ -1.16
Col17a1Q07563 Gm28437-201ENSMUST00000190277 783 ntBASIC7.83□□□□□ -1.16
Col17a1Q07563 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC7.83□□□□□ -1.16
Col17a1Q07563 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Col17a1Q07563 Gm37676-201ENSMUST00000195496 507 ntBASIC7.83□□□□□ -1.16
Col17a1Q07563 Gm8556-201ENSMUST00000210437 664 ntBASIC7.83□□□□□ -1.16
Col17a1Q07563 Gm7807-201ENSMUST00000212475 578 ntBASIC7.83□□□□□ -1.16
Col17a1Q07563 Gm18329-201ENSMUST00000215832 589 ntBASIC7.83□□□□□ -1.16
Col17a1Q07563 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC7.83□□□□□ -1.16
Col17a1Q07563 AC154747.1-201ENSMUST00000225265 239 ntBASIC7.83□□□□□ -1.16
Col17a1Q07563 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Col17a1Q07563 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Col17a1Q07563 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC7.83□□□□□ -1.16
Col17a1Q07563 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Col17a1Q07563 Gm5265-201ENSMUST00000076828 342 ntBASIC7.83□□□□□ -1.16
Col17a1Q07563 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col17a1Q07563 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col17a1Q07563 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col17a1Q07563 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Col17a1Q07563 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Col17a1Q07563 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col17a1Q07563 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Col17a1Q07563 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC7.82□□□□□ -1.16
Col17a1Q07563 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Col17a1Q07563 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col17a1Q07563 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC7.82□□□□□ -1.16
Col17a1Q07563 Gm3931-201ENSMUST00000119038 455 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms