Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Magea9-ps-201ENSMUST00000140655 732 ntBASIC4.26□□□□□ -1.73
Nkx3-1P97436 Gm26085-201ENSMUST00000157900 116 ntBASIC4.26□□□□□ -1.73
Nkx3-1P97436 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Nkx3-1P97436 Magea9-ps-202ENSMUST00000167328 899 ntBASIC4.26□□□□□ -1.73
Nkx3-1P97436 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Nkx3-1P97436 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Nkx3-1P97436 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Nkx3-1P97436 Vmn1r82-202ENSMUST00000191002 918 ntBASIC4.26□□□□□ -1.73
Nkx3-1P97436 Gm37492-201ENSMUST00000191948 376 ntBASIC4.26□□□□□ -1.73
Nkx3-1P97436 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.26□□□□□ -1.73
Nkx3-1P97436 Gm17999-201ENSMUST00000211568 542 ntBASIC4.26□□□□□ -1.73
Nkx3-1P97436 Gm19095-201ENSMUST00000220533 730 ntBASIC4.26□□□□□ -1.73
Nkx3-1P97436 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Nkx3-1P97436 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Nkx3-1P97436 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC4.26□□□□□ -1.73
Nkx3-1P97436 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Nkx3-1P97436 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Nkx3-1P97436 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.26□□□□□ -1.73
Nkx3-1P97436 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Nkx3-1P97436 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Gm38368-201ENSMUST00000193181 1335 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Gm3978-201ENSMUST00000163406 2512 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 Gm15185-201ENSMUST00000117397 746 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 Gm14560-201ENSMUST00000118672 375 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 Gm13503-201ENSMUST00000119017 446 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Gm24113-201ENSMUST00000157477 276 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 Gm16571-201ENSMUST00000159112 291 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Gm27818-201ENSMUST00000184536 159 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Gm37682-201ENSMUST00000191776 522 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 Gm37780-201ENSMUST00000194117 1873 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Gm44402-201ENSMUST00000203677 238 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 Gm6261-201ENSMUST00000204707 760 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 AC137127.3-201ENSMUST00000213340 349 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Nkx3-1P97436 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Olfr881-201ENSMUST00000074611 948 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.25□□□□□ -1.73
Nkx3-1P97436 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Gm6503-201ENSMUST00000210829 2225 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Nkx3-1P97436 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 Gm37703-201ENSMUST00000192292 1784 ntBASIC4.25□□□□□ -1.73
Nkx3-1P97436 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.24□□□□□ -1.73
Nkx3-1P97436 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Gm14756-201ENSMUST00000116395 240 ntBASIC4.24□□□□□ -1.73
Nkx3-1P97436 Gm11742-201ENSMUST00000119903 233 ntBASIC4.24□□□□□ -1.73
Nkx3-1P97436 Gm4852-201ENSMUST00000121202 729 ntBASIC4.24□□□□□ -1.73
Nkx3-1P97436 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.24□□□□□ -1.73
Nkx3-1P97436 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Gm25907-201ENSMUST00000158486 125 ntBASIC4.24□□□□□ -1.73
Nkx3-1P97436 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC4.24□□□□□ -1.73
Nkx3-1P97436 Gm37710-201ENSMUST00000193501 1274 ntBASIC4.24□□□□□ -1.73
Nkx3-1P97436 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Gm43717-201ENSMUST00000198684 310 ntBASIC4.24□□□□□ -1.73
Nkx3-1P97436 Gm6366-201ENSMUST00000198766 826 ntBASIC4.24□□□□□ -1.73
Nkx3-1P97436 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 Gm9655-201ENSMUST00000211321 1284 ntBASIC4.24□□□□□ -1.73
Nkx3-1P97436 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.24□□□□□ -1.73
Nkx3-1P97436 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.24□□□□□ -1.73
Nkx3-1P97436 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms