Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Hmgb1P63158 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Hmgb1P63158 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hmgb1P63158 Gm21037-201ENSMUST00000209086 2608 ntBASIC6.24□□□□□ -1.41
Hmgb1P63158 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.24□□□□□ -1.41
Hmgb1P63158 Gm38125-201ENSMUST00000194136 3438 ntBASIC6.24□□□□□ -1.41
Hmgb1P63158 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Hmgb1P63158 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm37964-201ENSMUST00000192459 4905 ntBASIC6.23□□□□□ -1.41
Hmgb1P63158 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Hmgb1P63158 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hmgb1P63158 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Hmgb1P63158 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hmgb1P63158 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC6.23□□□□□ -1.41
Hmgb1P63158 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm24340-201ENSMUST00000104208 97 ntBASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm25422-201ENSMUST00000104219 129 ntBASIC6.23□□□□□ -1.41
Hmgb1P63158 Zfp389-201ENSMUST00000118425 675 ntBASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm14534-201ENSMUST00000120045 357 ntBASIC6.23□□□□□ -1.41
Hmgb1P63158 Mup-ps13-201ENSMUST00000120662 545 ntBASIC6.23□□□□□ -1.41
Hmgb1P63158 Mup-ps1-201ENSMUST00000120720 544 ntBASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm13578-201ENSMUST00000120849 590 ntBASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm13363-201ENSMUST00000122008 522 ntBASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm11341-201ENSMUST00000122316 447 ntBASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.23□□□□□ -1.41
Hmgb1P63158 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC6.23□□□□□ -1.41
Hmgb1P63158 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm22223-201ENSMUST00000157360 125 ntBASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm23149-201ENSMUST00000158837 230 ntBASIC6.23□□□□□ -1.41
Hmgb1P63158 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm20620-201ENSMUST00000177528 168 ntBASIC6.23□□□□□ -1.41
Hmgb1P63158 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm25942-201ENSMUST00000180080 110 ntBASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm42886-201ENSMUST00000199214 466 ntBASIC6.23□□□□□ -1.41
Hmgb1P63158 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hmgb1P63158 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Hmgb1P63158 AC133203.1-201ENSMUST00000228241 301 ntBASIC6.23□□□□□ -1.41
Hmgb1P63158 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Hmgb1P63158 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm23795-201ENSMUST00000084006 137 ntBASIC6.23□□□□□ -1.41
Hmgb1P63158 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hmgb1P63158 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC6.23□□□□□ -1.41
Hmgb1P63158 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hmgb1P63158 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC6.23□□□□□ -1.41
Hmgb1P63158 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Hmgb1P63158 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC6.23□□□□□ -1.41
Hmgb1P63158 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm36298-201ENSMUST00000223394 1732 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm38451-201ENSMUST00000208329 2646 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm9597-202ENSMUST00000227632 1387 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb1P63158 AC124586.1-201ENSMUST00000221673 2795 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Hmgb1P63158 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Hmgb1P63158 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb1P63158 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb1P63158 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Hmgb1P63158 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm13835-201ENSMUST00000118459 685 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Hmgb1P63158 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm22208-201ENSMUST00000122658 110 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm23964-201ENSMUST00000157966 107 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm26170-201ENSMUST00000158419 148 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm27512-201ENSMUST00000175328 126 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb1P63158 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm27538-201ENSMUST00000185065 294 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm37719-201ENSMUST00000194615 292 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm42926-201ENSMUST00000200496 697 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm44312-201ENSMUST00000203536 469 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm44134-202ENSMUST00000204777 545 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb1P63158 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb1P63158 AC164629.1-201ENSMUST00000220250 1113 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC6.22□□□□□ -1.41
Hmgb1P63158 AC166358.4-201ENSMUST00000223030 105 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Hmgb1P63158 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm7887-201ENSMUST00000056948 537 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb1P63158 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb1P63158 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Hmgb1P63158 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms