Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm20287-201ENSMUST00000172848 2367 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cdh11P55288 Mir1188-201ENSMUST00000116756 120 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Gm14711-201ENSMUST00000117056 217 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Gm7312-201ENSMUST00000118798 469 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Cdh11P55288 Gm11742-201ENSMUST00000119903 233 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Gm13787-201ENSMUST00000120422 168 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Gm5383-201ENSMUST00000121177 617 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Gm11385-201ENSMUST00000121513 570 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Gm11894-201ENSMUST00000121579 328 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Gm23211-201ENSMUST00000122717 308 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Gm25290-201ENSMUST00000122796 144 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC4.67□□□□□ -1.66
Cdh11P55288 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Cdh11P55288 Gm6245-201ENSMUST00000164699 768 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Gm17223-201ENSMUST00000171413 481 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cdh11P55288 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Cdh11P55288 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cdh11P55288 Gm8321-201ENSMUST00000181691 980 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Mir6343-201ENSMUST00000183584 84 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Mir7006-201ENSMUST00000183624 69 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC4.67□□□□□ -1.66
Cdh11P55288 Gm28660-201ENSMUST00000186496 253 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Gm28683-201ENSMUST00000187134 615 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Gm28840-205ENSMUST00000189320 615 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Gm28835-203ENSMUST00000190062 615 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cdh11P55288 Gm6546-201ENSMUST00000192096 766 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Gm37708-201ENSMUST00000192337 895 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Gm7496-201ENSMUST00000192573 1034 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Gm38011-201ENSMUST00000193312 279 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Gm43093-201ENSMUST00000202439 1213 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 AC134537.2-201ENSMUST00000217770 575 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Gm18039-201ENSMUST00000217816 728 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC4.67□□□□□ -1.66
Cdh11P55288 AC131745.2-201ENSMUST00000225736 565 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 AC130547.1-201ENSMUST00000228079 1047 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Cdh11P55288 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Cdh11P55288 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cdh11P55288 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
Cdh11P55288 Gm22456-201ENSMUST00000082578 125 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Mir449a-201ENSMUST00000083641 91 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Cdh11P55288 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Cdh11P55288 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.67□□□□□ -1.66
Cdh11P55288 Gm44235-201ENSMUST00000204312 3058 ntBASIC4.67□□□□□ -1.66
Cdh11P55288 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Cdh11P55288 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
Cdh11P55288 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Cdh11P55288 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cdh11P55288 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Cdh11P55288 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cdh11P55288 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Cdh11P55288 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh11P55288 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh11P55288 Gm43164-201ENSMUST00000202529 2128 ntBASIC4.66□□□□□ -1.66
Cdh11P55288 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh11P55288 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh11P55288 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Cdh11P55288 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.66□□□□□ -1.66
Cdh11P55288 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh11P55288 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Cdh11P55288 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Cdh11P55288 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
Cdh11P55288 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC4.66□□□□□ -1.66
Cdh11P55288 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh11P55288 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh11P55288 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh11P55288 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC4.66□□□□□ -1.66
Cdh11P55288 Gm2288-201ENSMUST00000118560 638 ntBASIC4.66□□□□□ -1.66
Cdh11P55288 Gm11975-201ENSMUST00000118772 481 ntBASIC4.66□□□□□ -1.66
Cdh11P55288 Gm11825-201ENSMUST00000120710 736 ntBASIC4.66□□□□□ -1.66
Cdh11P55288 Gm13738-201ENSMUST00000122437 469 ntBASIC4.66□□□□□ -1.66
Cdh11P55288 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh11P55288 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC4.66□□□□□ -1.66
Cdh11P55288 Gm24860-201ENSMUST00000158457 276 ntBASIC4.66□□□□□ -1.66
Cdh11P55288 Gm18415-201ENSMUST00000177464 647 ntBASIC4.66□□□□□ -1.66
Cdh11P55288 Gm27541-201ENSMUST00000184078 122 ntBASIC4.66□□□□□ -1.66
Cdh11P55288 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.66□□□□□ -1.66
Cdh11P55288 Gm20776-201ENSMUST00000189940 700 ntBASIC4.66□□□□□ -1.66
Cdh11P55288 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC4.66□□□□□ -1.66
Cdh11P55288 Gm43308-201ENSMUST00000197236 373 ntBASIC4.66□□□□□ -1.66
Cdh11P55288 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC4.66□□□□□ -1.66
Cdh11P55288 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh11P55288 Gm42663-201ENSMUST00000199883 351 ntBASIC4.66□□□□□ -1.66
Cdh11P55288 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
Cdh11P55288 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC4.66□□□□□ -1.66
Cdh11P55288 Gm18997-201ENSMUST00000216353 822 ntBASIC4.66□□□□□ -1.66
Cdh11P55288 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh11P55288 AC125539.1-202ENSMUST00000226449 670 ntBASIC4.66□□□□□ -1.66
Cdh11P55288 Diaph3-206ENSMUST00000226745 713 ntBASIC4.66□□□□□ -1.66
Cdh11P55288 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
Cdh11P55288 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh11P55288 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms