Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Sox1P53783 Mir342-201ENSMUST00000083502 99 ntBASIC6.36□□□□□ -1.39
Sox1P53783 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Sox1P53783 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Sox1P53783 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.36□□□□□ -1.39
Sox1P53783 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Sox1P53783 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox1P53783 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sox1P53783 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Sox1P53783 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox1P53783 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Sox1P53783 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox1P53783 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox1P53783 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sox1P53783 Gm3675-201ENSMUST00000175904 1653 ntBASIC6.36□□□□□ -1.39
Sox1P53783 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox1P53783 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sox1P53783 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.36□□□□□ -1.39
Sox1P53783 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox1P53783 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox1P53783 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Sox1P53783 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox1P53783 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC6.35□□□□□ -1.39
Sox1P53783 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC6.35□□□□□ -1.39
Sox1P53783 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox1P53783 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Sox1P53783 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox1P53783 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox1P53783 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox1P53783 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox1P53783 Gm24935-201ENSMUST00000103770 110 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Gm26079-201ENSMUST00000104066 133 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Gm22342-201ENSMUST00000122647 298 ntBASIC6.35□□□□□ -1.39
Sox1P53783 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Gm25427-201ENSMUST00000157605 103 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Gm24860-201ENSMUST00000158457 276 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Gm24741-201ENSMUST00000158857 106 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC6.35□□□□□ -1.39
Sox1P53783 Gm27013-201ENSMUST00000182441 1024 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox1P53783 Gm29284-201ENSMUST00000188363 255 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Gm8458-201ENSMUST00000196658 819 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Gm43856-201ENSMUST00000197004 369 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Igkv15-97-201ENSMUST00000197637 339 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Gm42999-201ENSMUST00000198049 786 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Gm36448-201ENSMUST00000199916 438 ntBASIC6.35□□□□□ -1.39
Sox1P53783 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox1P53783 AC124826.1-201ENSMUST00000221651 325 ntBASIC6.35□□□□□ -1.39
Sox1P53783 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC6.35□□□□□ -1.39
Sox1P53783 Mir325-201ENSMUST00000083491 98 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Gm26176-201ENSMUST00000083795 105 ntBASIC6.35□□□□□ -1.39
Sox1P53783 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Sox1P53783 Gm14912-201ENSMUST00000120166 1773 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.35□□□□□ -1.39
Sox1P53783 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Sox1P53783 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
Sox1P53783 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Sox1P53783 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox1P53783 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox1P53783 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox1P53783 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox1P53783 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox1P53783 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Sox1P53783 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.35□□□□□ -1.39
Sox1P53783 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox1P53783 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Sox1P53783 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Sox1P53783 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Sox1P53783 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.35□□□□□ -1.39
Sox1P53783 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.35□□□□□ -1.39
Sox1P53783 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox1P53783 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC6.34□□□□□ -1.39
Sox1P53783 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox1P53783 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox1P53783 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.34□□□□□ -1.39
Sox1P53783 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
Sox1P53783 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox1P53783 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox1P53783 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox1P53783 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox1P53783 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox1P53783 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox1P53783 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox1P53783 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox1P53783 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Sox1P53783 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Sox1P53783 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Sox1P53783 Gm22499-201ENSMUST00000104501 135 ntBASIC6.34□□□□□ -1.39
Sox1P53783 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC6.34□□□□□ -1.39
Sox1P53783 Gm15076-201ENSMUST00000117076 474 ntBASIC6.34□□□□□ -1.39
Sox1P53783 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC6.34□□□□□ -1.39
Sox1P53783 Gm11625-201ENSMUST00000119535 296 ntBASIC6.34□□□□□ -1.39
Sox1P53783 Gm5287-201ENSMUST00000120666 598 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms