Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm43793-201ENSMUST00000201645 1333 ntBASIC6.65□□□□□ -1.35
Sox18P43680 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Sox18P43680 Gm10862-201ENSMUST00000193956 3350 ntBASIC6.65□□□□□ -1.35
Sox18P43680 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Sox18P43680 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC6.65□□□□□ -1.35
Sox18P43680 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Sox18P43680 Gm43314-201ENSMUST00000196744 2231 ntBASIC6.65□□□□□ -1.35
Sox18P43680 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC6.65□□□□□ -1.35
Sox18P43680 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC6.65□□□□□ -1.35
Sox18P43680 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Sox18P43680 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Sox18P43680 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Sox18P43680 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
Sox18P43680 CT025535.2-201ENSMUST00000228572 7441 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.64□□□□□ -1.35
Sox18P43680 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Sox18P43680 Gm15203-201ENSMUST00000117668 455 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Gm14652-201ENSMUST00000118479 235 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Gm15300-201ENSMUST00000122324 279 ntBASIC6.64□□□□□ -1.35
Sox18P43680 n-R5s87-201ENSMUST00000122752 116 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Gm22262-201ENSMUST00000158713 86 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Gm27960-201ENSMUST00000183445 184 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Mir7008-201ENSMUST00000184398 63 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.64□□□□□ -1.35
Sox18P43680 Gm32447-201ENSMUST00000194265 697 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Gm37495-201ENSMUST00000194590 264 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC6.64□□□□□ -1.35
Sox18P43680 Gm42673-201ENSMUST00000202676 337 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC6.64□□□□□ -1.35
Sox18P43680 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.64□□□□□ -1.35
Sox18P43680 Gm8158-201ENSMUST00000219220 465 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Gm8249-201ENSMUST00000219225 465 ntBASIC6.64□□□□□ -1.35
Sox18P43680 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Gm8112-201ENSMUST00000219637 465 ntBASIC6.64□□□□□ -1.35
Sox18P43680 AC125399.1-201ENSMUST00000224236 595 ntBASIC6.64□□□□□ -1.35
Sox18P43680 AV026068-231ENSMUST00000225862 482 ntBASIC6.64□□□□□ -1.35
Sox18P43680 CT025157.1-201ENSMUST00000226241 292 ntBASIC6.64□□□□□ -1.35
Sox18P43680 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Gm23733-201ENSMUST00000083750 106 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 n-R5s27-201ENSMUST00000093699 119 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Olfr713-201ENSMUST00000098139 975 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Gm37520-201ENSMUST00000194883 2672 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.64□□□□□ -1.35
Sox18P43680 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Sox18P43680 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.64□□□□□ -1.35
Sox18P43680 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Sox18P43680 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Sox18P43680 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Sox18P43680 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Sox18P43680 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.64□□□□□ -1.35
Sox18P43680 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Sox18P43680 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Sox18P43680 Gm45887-201ENSMUST00000212672 2998 ntBASIC6.63□□□□□ -1.35
Sox18P43680 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox18P43680 Gm38386-201ENSMUST00000194293 3421 ntBASIC6.63□□□□□ -1.35
Sox18P43680 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox18P43680 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox18P43680 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox18P43680 Mir674-201ENSMUST00000102421 100 ntBASIC6.63□□□□□ -1.35
Sox18P43680 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Sox18P43680 Mir466h-201ENSMUST00000104748 81 ntBASIC6.63□□□□□ -1.35
Sox18P43680 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Sox18P43680 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox18P43680 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Sox18P43680 Gm12245-201ENSMUST00000117266 357 ntBASIC6.63□□□□□ -1.35
Sox18P43680 Gm14893-201ENSMUST00000117904 282 ntBASIC6.63□□□□□ -1.35
Sox18P43680 Gm11313-201ENSMUST00000118779 432 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms