Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC5.41□□□□□ -1.54
Col2a1P28481 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.41□□□□□ -1.54
Col2a1P28481 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col2a1P28481 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col2a1P28481 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col2a1P28481 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col2a1P28481 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col2a1P28481 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col2a1P28481 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col2a1P28481 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col2a1P28481 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col2a1P28481 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.41□□□□□ -1.54
Col2a1P28481 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.41□□□□□ -1.54
Col2a1P28481 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col2a1P28481 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col2a1P28481 AC122263.1-201ENSMUST00000228636 2805 ntBASIC5.41□□□□□ -1.54
Col2a1P28481 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col2a1P28481 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Col2a1P28481 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
Col2a1P28481 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col2a1P28481 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.41□□□□□ -1.54
Col2a1P28481 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.41□□□□□ -1.54
Col2a1P28481 Gm37114-201ENSMUST00000195065 1804 ntBASIC5.4□□□□□ -1.54
Col2a1P28481 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.4□□□□□ -1.54
Col2a1P28481 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col2a1P28481 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col2a1P28481 Gm22498-201ENSMUST00000104497 86 ntBASIC5.4□□□□□ -1.54
Col2a1P28481 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col2a1P28481 Gm6884-201ENSMUST00000119318 615 ntBASIC5.4□□□□□ -1.54
Col2a1P28481 Gm12189-201ENSMUST00000119779 912 ntBASIC5.4□□□□□ -1.54
Col2a1P28481 Gm23465-201ENSMUST00000157134 262 ntBASIC5.4□□□□□ -1.54
Col2a1P28481 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.4□□□□□ -1.54
Col2a1P28481 Gm29196-201ENSMUST00000189239 618 ntBASIC5.4□□□□□ -1.54
Col2a1P28481 Gm28389-201ENSMUST00000190090 697 ntBASIC5.4□□□□□ -1.54
Col2a1P28481 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC5.4□□□□□ -1.54
Col2a1P28481 Gm18181-201ENSMUST00000190670 736 ntBASIC5.4□□□□□ -1.54
Col2a1P28481 Gm37088-201ENSMUST00000193887 406 ntBASIC5.4□□□□□ -1.54
Col2a1P28481 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col2a1P28481 Gm5284-201ENSMUST00000199053 903 ntBASIC5.4□□□□□ -1.54
Col2a1P28481 Gm44485-201ENSMUST00000199569 137 ntBASIC5.4□□□□□ -1.54
Col2a1P28481 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col2a1P28481 Gm45857-201ENSMUST00000212207 356 ntBASIC5.4□□□□□ -1.54
Col2a1P28481 AC164116.1-201ENSMUST00000225810 622 ntBASIC5.4□□□□□ -1.54
Col2a1P28481 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col2a1P28481 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col2a1P28481 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC5.4□□□□□ -1.54
Col2a1P28481 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.4□□□□□ -1.54
Col2a1P28481 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.4□□□□□ -1.54
Col2a1P28481 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col2a1P28481 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col2a1P28481 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Col2a1P28481 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Col2a1P28481 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
Col2a1P28481 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col2a1P28481 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col2a1P28481 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col2a1P28481 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col2a1P28481 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
Col2a1P28481 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC5.4□□□□□ -1.55
Col2a1P28481 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.4□□□□□ -1.55
Col2a1P28481 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC5.4□□□□□ -1.55
Col2a1P28481 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC5.4□□□□□ -1.55
Col2a1P28481 Gm37283-201ENSMUST00000193111 1571 ntBASIC5.4□□□□□ -1.55
Col2a1P28481 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col2a1P28481 Gm11914-201ENSMUST00000117094 507 ntBASIC5.39□□□□□ -1.55
Col2a1P28481 Gm14854-201ENSMUST00000117758 841 ntBASIC5.39□□□□□ -1.55
Col2a1P28481 Gm12332-201ENSMUST00000121397 922 ntBASIC5.39□□□□□ -1.55
Col2a1P28481 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC5.39□□□□□ -1.55
Col2a1P28481 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col2a1P28481 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col2a1P28481 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.39□□□□□ -1.55
Col2a1P28481 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC5.39□□□□□ -1.55
Col2a1P28481 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.39□□□□□ -1.55
Col2a1P28481 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col2a1P28481 Gm23099-201ENSMUST00000083454 139 ntBASIC5.39□□□□□ -1.55
Col2a1P28481 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Col2a1P28481 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col2a1P28481 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.39□□□□□ -1.55
Col2a1P28481 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.39□□□□□ -1.55
Col2a1P28481 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Col2a1P28481 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.39□□□□□ -1.55
Col2a1P28481 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col2a1P28481 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.39□□□□□ -1.55
Col2a1P28481 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Col2a1P28481 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col2a1P28481 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col2a1P28481 Gm12884-201ENSMUST00000120371 325 ntBASIC5.39□□□□□ -1.55
Col2a1P28481 Gm14303-201ENSMUST00000121320 171 ntBASIC5.39□□□□□ -1.55
Col2a1P28481 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.39□□□□□ -1.55
Col2a1P28481 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.39□□□□□ -1.55
Col2a1P28481 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.39□□□□□ -1.55
Col2a1P28481 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC5.39□□□□□ -1.55
Col2a1P28481 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC5.39□□□□□ -1.55
Col2a1P28481 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.39□□□□□ -1.55
Col2a1P28481 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col2a1P28481 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col2a1P28481 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col2a1P28481 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.38□□□□□ -1.55
Col2a1P28481 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col2a1P28481 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms