Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Sdc1P18828 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Sdc1P18828 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Sdc1P18828 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC3.95□□□□□ -1.78
Sdc1P18828 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Sdc1P18828 Gm24350-201ENSMUST00000104163 133 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Gm13176-201ENSMUST00000117910 477 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Gm8475-201ENSMUST00000118211 526 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC3.95□□□□□ -1.78
Sdc1P18828 Gm12422-201ENSMUST00000121431 302 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Gm25176-201ENSMUST00000122640 125 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC3.95□□□□□ -1.78
Sdc1P18828 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Sdc1P18828 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC3.95□□□□□ -1.78
Sdc1P18828 Gm12504-202ENSMUST00000148026 306 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC3.95□□□□□ -1.78
Sdc1P18828 Gm22968-201ENSMUST00000157955 118 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Gm3216-201ENSMUST00000166927 486 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Gm3141-201ENSMUST00000168726 499 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC3.95□□□□□ -1.78
Sdc1P18828 Gm25037-201ENSMUST00000175418 110 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Gm27854-201ENSMUST00000175578 244 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC3.95□□□□□ -1.78
Sdc1P18828 Gm19427-201ENSMUST00000183619 208 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC3.95□□□□□ -1.78
Sdc1P18828 Gm3351-201ENSMUST00000193454 505 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Gm38080-201ENSMUST00000194035 268 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Gm36985-201ENSMUST00000195595 379 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC3.95□□□□□ -1.78
Sdc1P18828 Gm44234-201ENSMUST00000204246 900 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Gm6230-201ENSMUST00000208077 780 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC3.95□□□□□ -1.78
Sdc1P18828 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC3.95□□□□□ -1.78
Sdc1P18828 CT025552.1-201ENSMUST00000224561 521 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 AC167013.2-202ENSMUST00000227035 333 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 AC151907.1-201ENSMUST00000228812 412 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Sdc1P18828 Olfr480-201ENSMUST00000071658 1029 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Sdc1P18828 Mir7b-201ENSMUST00000083557 111 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Sdc1P18828 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Sdc1P18828 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Sdc1P18828 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Sdc1P18828 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Sdc1P18828 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Sdc1P18828 Gm45160-201ENSMUST00000207112 3099 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Sdc1P18828 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
Sdc1P18828 Gm45324-201ENSMUST00000211193 5638 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC3.95□□□□□ -1.78
Sdc1P18828 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Sdc1P18828 Gm37345-201ENSMUST00000193062 3138 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Sdc1P18828 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Sdc1P18828 Gm37831-201ENSMUST00000191685 1787 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Sdc1P18828 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Sdc1P18828 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Sdc1P18828 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Sdc1P18828 Gm43888-201ENSMUST00000204405 2587 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC3.94□□□□□ -1.78
Sdc1P18828 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Sdc1P18828 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Sdc1P18828 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC3.94□□□□□ -1.78
Sdc1P18828 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Sdc1P18828 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Sdc1P18828 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Sdc1P18828 Gm22284-201ENSMUST00000104132 132 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 Gm22371-201ENSMUST00000104588 130 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 Gm11673-201ENSMUST00000117846 331 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 Gm11350-201ENSMUST00000121436 870 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 Gm11910-201ENSMUST00000121624 432 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 Gm15212-201ENSMUST00000122403 466 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Sdc1P18828 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Sdc1P18828 Gm2619-202ENSMUST00000166777 651 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC3.94□□□□□ -1.78
Sdc1P18828 Gm28263-201ENSMUST00000185884 400 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Sdc1P18828 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Sdc1P18828 Gm19280-201ENSMUST00000190191 205 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC3.94□□□□□ -1.78
Sdc1P18828 Ighv1-29-201ENSMUST00000194116 342 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Sdc1P18828 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Sdc1P18828 AC133189.1-201ENSMUST00000198820 140 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 Gm29815-201ENSMUST00000202418 178 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 Gm44892-201ENSMUST00000208595 488 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 Gm8556-201ENSMUST00000210437 664 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 Gm45850-201ENSMUST00000212536 338 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC3.94□□□□□ -1.78
Sdc1P18828 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Sdc1P18828 AC164424.1-201ENSMUST00000221690 170 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Sdc1P18828 AC131745.1-201ENSMUST00000223660 330 ntBASIC3.94□□□□□ -1.78
Sdc1P18828 AC241593.2-201ENSMUST00000225099 510 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms