Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.14□□□□□ -1.59
Lire1P11260 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC5.14□□□□□ -1.59
Lire1P11260 Gm12245-201ENSMUST00000117266 357 ntBASIC5.14□□□□□ -1.59
Lire1P11260 Gm15141-201ENSMUST00000121860 729 ntBASIC5.14□□□□□ -1.59
Lire1P11260 Gm12488-201ENSMUST00000122449 499 ntBASIC5.14□□□□□ -1.59
Lire1P11260 Gm22959-201ENSMUST00000122514 303 ntBASIC5.14□□□□□ -1.59
Lire1P11260 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.14□□□□□ -1.59
Lire1P11260 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC5.14□□□□□ -1.59
Lire1P11260 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC5.14□□□□□ -1.59
Lire1P11260 Gm6632-201ENSMUST00000168425 954 ntBASIC5.14□□□□□ -1.59
Lire1P11260 Gm9890-201ENSMUST00000171867 537 ntBASIC5.14□□□□□ -1.59
Lire1P11260 Gm20397-201ENSMUST00000174520 362 ntBASIC5.14□□□□□ -1.59
Lire1P11260 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.14□□□□□ -1.59
Lire1P11260 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Lire1P11260 Gm29086-201ENSMUST00000186774 222 ntBASIC5.14□□□□□ -1.59
Lire1P11260 Gm29085-201ENSMUST00000187108 225 ntBASIC5.14□□□□□ -1.59
Lire1P11260 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.14□□□□□ -1.59
Lire1P11260 Gm43516-201ENSMUST00000196891 322 ntBASIC5.14□□□□□ -1.59
Lire1P11260 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC5.14□□□□□ -1.59
Lire1P11260 Gm44869-201ENSMUST00000208836 357 ntBASIC5.14□□□□□ -1.59
Lire1P11260 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.14□□□□□ -1.59
Lire1P11260 AC132104.1-201ENSMUST00000213615 260 ntBASIC5.14□□□□□ -1.59
Lire1P11260 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.14□□□□□ -1.59
Lire1P11260 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.14□□□□□ -1.59
Lire1P11260 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.14□□□□□ -1.59
Lire1P11260 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.14□□□□□ -1.59
Lire1P11260 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.14□□□□□ -1.59
Lire1P11260 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lire1P11260 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Lire1P11260 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Lire1P11260 Gm23737-201ENSMUST00000082547 159 ntBASIC5.14□□□□□ -1.59
Lire1P11260 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lire1P11260 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lire1P11260 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.14□□□□□ -1.59
Lire1P11260 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.14□□□□□ -1.59
Lire1P11260 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Lire1P11260 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Lire1P11260 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lire1P11260 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lire1P11260 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Lire1P11260 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Lire1P11260 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Lire1P11260 AC149294.7-201ENSMUST00000227475 1432 ntBASIC5.14□□□□□ -1.59
Lire1P11260 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.13□□□□□ -1.59
Lire1P11260 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.13□□□□□ -1.59
Lire1P11260 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Lire1P11260 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Lire1P11260 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Lire1P11260 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Lire1P11260 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Lire1P11260 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lire1P11260 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Lire1P11260 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Lire1P11260 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Lire1P11260 Gm14836-201ENSMUST00000118567 471 ntBASIC5.13□□□□□ -1.59
Lire1P11260 Gm13473-201ENSMUST00000119289 367 ntBASIC5.13□□□□□ -1.59
Lire1P11260 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.13□□□□□ -1.59
Lire1P11260 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Lire1P11260 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.13□□□□□ -1.59
Lire1P11260 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.13□□□□□ -1.59
Lire1P11260 Gm22261-201ENSMUST00000158691 324 ntBASIC5.13□□□□□ -1.59
Lire1P11260 Gm29668-201ENSMUST00000187802 315 ntBASIC5.13□□□□□ -1.59
Lire1P11260 Gm28116-201ENSMUST00000189064 387 ntBASIC5.13□□□□□ -1.59
Lire1P11260 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC5.13□□□□□ -1.59
Lire1P11260 Gm37632-201ENSMUST00000191811 1142 ntBASIC5.13□□□□□ -1.59
Lire1P11260 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Lire1P11260 Gm7733-201ENSMUST00000199038 919 ntBASIC5.13□□□□□ -1.59
Lire1P11260 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5.13□□□□□ -1.59
Lire1P11260 Gm19060-201ENSMUST00000201959 421 ntBASIC5.13□□□□□ -1.59
Lire1P11260 Gm44219-201ENSMUST00000203005 273 ntBASIC5.13□□□□□ -1.59
Lire1P11260 Gm44412-201ENSMUST00000203018 294 ntBASIC5.13□□□□□ -1.59
Lire1P11260 Gm44053-201ENSMUST00000203364 929 ntBASIC5.13□□□□□ -1.59
Lire1P11260 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.13□□□□□ -1.59
Lire1P11260 Gm19900-201ENSMUST00000207285 576 ntBASIC5.13□□□□□ -1.59
Lire1P11260 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC5.13□□□□□ -1.59
Lire1P11260 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.13□□□□□ -1.59
Lire1P11260 Diaph3-206ENSMUST00000226745 713 ntBASIC5.13□□□□□ -1.59
Lire1P11260 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lire1P11260 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lire1P11260 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lire1P11260 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lire1P11260 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Lire1P11260 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lire1P11260 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lire1P11260 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Lire1P11260 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Lire1P11260 Gm24525-201ENSMUST00000082917 151 ntBASIC5.13□□□□□ -1.59
Lire1P11260 Mir134-201ENSMUST00000083492 71 ntBASIC5.13□□□□□ -1.59
Lire1P11260 Gm25682-201ENSMUST00000083942 164 ntBASIC5.13□□□□□ -1.59
Lire1P11260 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Lire1P11260 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lire1P11260 Gm43197-201ENSMUST00000201493 2583 ntBASIC5.13□□□□□ -1.59
Lire1P11260 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lire1P11260 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Lire1P11260 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lire1P11260 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Lire1P11260 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Lire1P11260 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Lire1P11260 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Lire1P11260 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 123.7 ms