Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col1a1P11087 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Col1a1P11087 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Col1a1P11087 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Col1a1P11087 Gm15189-201ENSMUST00000121164 1966 ntBASIC5.59□□□□□ -1.52
Col1a1P11087 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Col1a1P11087 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col1a1P11087 Gm13214-201ENSMUST00000122137 408 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Gm24961-201ENSMUST00000157918 184 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC5.58□□□□□ -1.52
Col1a1P11087 Gm13249-201ENSMUST00000177803 345 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Gm13144-201ENSMUST00000179385 345 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Gm29228-201ENSMUST00000185489 418 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Gm28304-201ENSMUST00000185977 312 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Gm6802-202ENSMUST00000186566 126 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC5.58□□□□□ -1.52
Col1a1P11087 Gm29256-201ENSMUST00000189094 312 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Gm29479-201ENSMUST00000190352 455 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Gm28484-201ENSMUST00000190606 312 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 AC113059.3-201ENSMUST00000217423 2777 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.58□□□□□ -1.52
Col1a1P11087 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC5.58□□□□□ -1.52
Col1a1P11087 AL589696.1-201ENSMUST00000225711 330 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col1a1P11087 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col1a1P11087 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col1a1P11087 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Col1a1P11087 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC5.58□□□□□ -1.52
Col1a1P11087 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col1a1P11087 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Gm36931-201ENSMUST00000192997 4801 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col1a1P11087 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col1a1P11087 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col1a1P11087 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col1a1P11087 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Col1a1P11087 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col1a1P11087 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Col1a1P11087 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Gm22498-201ENSMUST00000104497 86 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Col1a1P11087 Gm12189-201ENSMUST00000119779 912 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col1a1P11087 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col1a1P11087 Gm16558-201ENSMUST00000163015 532 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC5.58□□□□□ -1.52
Col1a1P11087 Gm17152-201ENSMUST00000172430 535 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Gm20673-201ENSMUST00000177167 430 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col1a1P11087 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC5.58□□□□□ -1.52
Col1a1P11087 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col1a1P11087 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col1a1P11087 Gm7093-201ENSMUST00000223004 581 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col1a1P11087 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col1a1P11087 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.58□□□□□ -1.52
Col1a1P11087 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col1a1P11087 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.57□□□□□ -1.52
Col1a1P11087 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
Col1a1P11087 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Col1a1P11087 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.57□□□□□ -1.52
Col1a1P11087 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.57□□□□□ -1.52
Col1a1P11087 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
Col1a1P11087 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col1a1P11087 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.57□□□□□ -1.52
Col1a1P11087 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col1a1P11087 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col1a1P11087 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col1a1P11087 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Col1a1P11087 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Col1a1P11087 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.57□□□□□ -1.52
Col1a1P11087 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC5.57□□□□□ -1.52
Col1a1P11087 Gm4557-201ENSMUST00000185826 907 ntBASIC5.57□□□□□ -1.52
Col1a1P11087 Gm4526-201ENSMUST00000186039 920 ntBASIC5.57□□□□□ -1.52
Col1a1P11087 Gm8708-201ENSMUST00000188500 906 ntBASIC5.57□□□□□ -1.52
Col1a1P11087 Gm4734-201ENSMUST00000200117 777 ntBASIC5.57□□□□□ -1.52
Col1a1P11087 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC5.57□□□□□ -1.52
Col1a1P11087 Gm19201-201ENSMUST00000210127 778 ntBASIC5.57□□□□□ -1.52
Col1a1P11087 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC5.57□□□□□ -1.52
Col1a1P11087 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Col1a1P11087 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Col1a1P11087 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Col1a1P11087 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Col1a1P11087 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col1a1P11087 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col1a1P11087 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col1a1P11087 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.56□□□□□ -1.52
Col1a1P11087 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col1a1P11087 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col1a1P11087 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col1a1P11087 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Col1a1P11087 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col1a1P11087 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.56□□□□□ -1.52
Col1a1P11087 Gm42986-201ENSMUST00000201618 3385 ntBASIC5.56□□□□□ -1.52
Col1a1P11087 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Col1a1P11087 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms