Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm15981-201ENSMUST00000119196 457 ntBASIC5.03□□□□□ -1.6
Hoxa9P09631 Gm23837-201ENSMUST00000122656 286 ntBASIC5.03□□□□□ -1.6
Hoxa9P09631 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxa9P09631 Gm6047-201ENSMUST00000167221 574 ntBASIC5.03□□□□□ -1.6
Hoxa9P09631 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxa9P09631 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxa9P09631 Gm27387-201ENSMUST00000184583 116 ntBASIC5.03□□□□□ -1.6
Hoxa9P09631 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxa9P09631 Gm9443-201ENSMUST00000188406 816 ntBASIC5.03□□□□□ -1.6
Hoxa9P09631 Gm29036-201ENSMUST00000189967 877 ntBASIC5.03□□□□□ -1.6
Hoxa9P09631 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC5.03□□□□□ -1.6
Hoxa9P09631 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC5.03□□□□□ -1.6
Hoxa9P09631 Gm5215-201ENSMUST00000054380 405 ntBASIC5.03□□□□□ -1.6
Hoxa9P09631 Gm7117-201ENSMUST00000071515 387 ntBASIC5.03□□□□□ -1.6
Hoxa9P09631 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.03□□□□□ -1.6
Hoxa9P09631 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.03□□□□□ -1.6
Hoxa9P09631 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.03□□□□□ -1.6
Hoxa9P09631 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Hoxa9P09631 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxa9P09631 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxa9P09631 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.03□□□□□ -1.6
Hoxa9P09631 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.03□□□□□ -1.6
Hoxa9P09631 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxa9P09631 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Hoxa9P09631 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxa9P09631 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Hoxa9P09631 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.02□□□□□ -1.61
Hoxa9P09631 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm11486-201ENSMUST00000107322 478 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm25103-201ENSMUST00000122671 318 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxa9P09631 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.02□□□□□ -1.61
Hoxa9P09631 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.02□□□□□ -1.61
Hoxa9P09631 Mir1947-201ENSMUST00000158235 85 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm8502-201ENSMUST00000185708 901 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm21147-201ENSMUST00000186046 913 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm19206-201ENSMUST00000186401 827 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm36998-201ENSMUST00000193205 704 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm9442-201ENSMUST00000194242 319 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm18382-201ENSMUST00000194394 582 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm37659-201ENSMUST00000194574 111 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5.02□□□□□ -1.61
Hoxa9P09631 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm6719-201ENSMUST00000202067 335 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.02□□□□□ -1.61
Hoxa9P09631 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm7045-201ENSMUST00000221466 605 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm46369-201ENSMUST00000221577 401 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxa9P09631 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Hoxa9P09631 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC5.02□□□□□ -1.61
Hoxa9P09631 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Hoxa9P09631 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.02□□□□□ -1.61
Hoxa9P09631 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxa9P09631 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxa9P09631 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Hoxa9P09631 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.01□□□□□ -1.61
Hoxa9P09631 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxa9P09631 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Hoxa9P09631 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Hoxa9P09631 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.01□□□□□ -1.61
Hoxa9P09631 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxa9P09631 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Hoxa9P09631 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxa9P09631 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxa9P09631 Gm14560-201ENSMUST00000118672 375 ntBASIC5.01□□□□□ -1.61
Hoxa9P09631 Gm9435-201ENSMUST00000120379 877 ntBASIC5.01□□□□□ -1.61
Hoxa9P09631 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxa9P09631 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Hoxa9P09631 Gm14587-201ENSMUST00000121714 658 ntBASIC5.01□□□□□ -1.61
Hoxa9P09631 Gm24402-201ENSMUST00000157873 91 ntBASIC5.01□□□□□ -1.61
Hoxa9P09631 Gm22326-201ENSMUST00000158897 351 ntBASIC5.01□□□□□ -1.61
Hoxa9P09631 Gm16285-201ENSMUST00000162999 347 ntBASIC5.01□□□□□ -1.61
Hoxa9P09631 Gm6673-201ENSMUST00000166114 700 ntBASIC5.01□□□□□ -1.61
Hoxa9P09631 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC5.01□□□□□ -1.61
Hoxa9P09631 Mir6926-201ENSMUST00000184562 68 ntBASIC5.01□□□□□ -1.61
Hoxa9P09631 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Hoxa9P09631 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms