Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Hoxd3P09027 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm22774-201ENSMUST00000102084 109 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm22781-201ENSMUST00000104083 137 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 n-R5s72-201ENSMUST00000104518 119 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm13355-201ENSMUST00000117996 317 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm8812-201ENSMUST00000118496 412 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm13877-201ENSMUST00000120614 417 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm15267-201ENSMUST00000120888 464 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm23657-201ENSMUST00000122623 294 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC5.47□□□□□ -1.53
Hoxd3P09027 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC5.47□□□□□ -1.53
Hoxd3P09027 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm24157-201ENSMUST00000175265 111 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm24300-201ENSMUST00000177809 109 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm26430-201ENSMUST00000178054 107 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm24017-201ENSMUST00000178726 109 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm23952-201ENSMUST00000179380 109 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm27014-201ENSMUST00000182658 937 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Mir8105-201ENSMUST00000184718 89 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm44322-201ENSMUST00000196830 115 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm44307-201ENSMUST00000204466 764 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm44002-201ENSMUST00000205134 594 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm18602-201ENSMUST00000209794 851 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm18850-201ENSMUST00000211578 388 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 AC155709.1-201ENSMUST00000218794 162 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm9315-201ENSMUST00000222696 908 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm10088-201ENSMUST00000074116 423 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm23054-201ENSMUST00000082804 162 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 n-R5s169-201ENSMUST00000083110 120 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm24451-201ENSMUST00000083353 133 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm16020-201ENSMUST00000084281 210 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm6043-201ENSMUST00000099961 492 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Hoxd3P09027 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Hoxd3P09027 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Hoxd3P09027 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm28583-201ENSMUST00000188903 2141 ntBASIC5.47□□□□□ -1.53
Hoxd3P09027 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Hoxd3P09027 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.46□□□□□ -1.53
Hoxd3P09027 CT030170.3-201ENSMUST00000221205 1815 ntBASIC5.46□□□□□ -1.53
Hoxd3P09027 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Hoxd3P09027 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Hoxd3P09027 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
Hoxd3P09027 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm44679-201ENSMUST00000207202 2908 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Hoxd3P09027 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Hoxd3P09027 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm25097-201ENSMUST00000104042 145 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm12174-201ENSMUST00000119853 813 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm15007-201ENSMUST00000119982 710 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm14129-201ENSMUST00000122436 291 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm23213-201ENSMUST00000122715 313 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Hoxd3P09027 Gm6956-201ENSMUST00000134724 546 ntBASIC5.46□□□□□ -1.54
Hoxd3P09027 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms