Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CopeO89079 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
CopeO89079 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CopeO89079 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CopeO89079 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CopeO89079 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CopeO89079 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CopeO89079 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
CopeO89079 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CopeO89079 Mir466i-201ENSMUST00000116924 121 ntBASIC4.8□□□□□ -1.64
CopeO89079 Gm11781-201ENSMUST00000118328 472 ntBASIC4.8□□□□□ -1.64
CopeO89079 Gm13488-201ENSMUST00000120419 179 ntBASIC4.8□□□□□ -1.64
CopeO89079 Gm9208-201ENSMUST00000120468 948 ntBASIC4.8□□□□□ -1.64
CopeO89079 Gm14784-201ENSMUST00000121604 663 ntBASIC4.8□□□□□ -1.64
CopeO89079 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC4.8□□□□□ -1.64
CopeO89079 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC4.8□□□□□ -1.64
CopeO89079 Gm26046-201ENSMUST00000157312 166 ntBASIC4.8□□□□□ -1.64
CopeO89079 Gm26373-201ENSMUST00000157833 103 ntBASIC4.8□□□□□ -1.64
CopeO89079 Gm24636-201ENSMUST00000158673 288 ntBASIC4.8□□□□□ -1.64
CopeO89079 Gm5258-201ENSMUST00000165437 327 ntBASIC4.8□□□□□ -1.64
CopeO89079 Gm6647-201ENSMUST00000170514 641 ntBASIC4.8□□□□□ -1.64
CopeO89079 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CopeO89079 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC4.8□□□□□ -1.64
CopeO89079 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CopeO89079 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC4.8□□□□□ -1.64
CopeO89079 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC4.8□□□□□ -1.64
CopeO89079 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
CopeO89079 Gm43304-201ENSMUST00000196803 326 ntBASIC4.8□□□□□ -1.64
CopeO89079 Gm5284-201ENSMUST00000199053 903 ntBASIC4.8□□□□□ -1.64
CopeO89079 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CopeO89079 Gm19195-201ENSMUST00000222018 511 ntBASIC4.8□□□□□ -1.64
CopeO89079 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.8□□□□□ -1.64
CopeO89079 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CopeO89079 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CopeO89079 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CopeO89079 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.8□□□□□ -1.64
CopeO89079 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CopeO89079 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.8□□□□□ -1.64
CopeO89079 Gm43831-201ENSMUST00000200461 2598 ntBASIC4.8□□□□□ -1.64
CopeO89079 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.8□□□□□ -1.64
CopeO89079 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CopeO89079 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CopeO89079 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.8□□□□□ -1.64
CopeO89079 Gm42905-201ENSMUST00000196237 1611 ntBASIC4.79□□□□□ -1.64
CopeO89079 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CopeO89079 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.79□□□□□ -1.64
CopeO89079 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.79□□□□□ -1.64
CopeO89079 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CopeO89079 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CopeO89079 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CopeO89079 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CopeO89079 Gm11550-201ENSMUST00000118210 699 ntBASIC4.79□□□□□ -1.64
CopeO89079 Gm12244-201ENSMUST00000119500 291 ntBASIC4.79□□□□□ -1.64
CopeO89079 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC4.79□□□□□ -1.64
CopeO89079 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.79□□□□□ -1.64
CopeO89079 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC4.79□□□□□ -1.64
CopeO89079 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CopeO89079 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.79□□□□□ -1.64
CopeO89079 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC4.79□□□□□ -1.64
CopeO89079 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC4.79□□□□□ -1.64
CopeO89079 Gm25389-201ENSMUST00000157340 286 ntBASIC4.79□□□□□ -1.64
CopeO89079 Gm23673-201ENSMUST00000157474 298 ntBASIC4.79□□□□□ -1.64
CopeO89079 Gm3008-201ENSMUST00000160566 571 ntBASIC4.79□□□□□ -1.64
CopeO89079 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CopeO89079 Mir3097-201ENSMUST00000175356 67 ntBASIC4.79□□□□□ -1.64
CopeO89079 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CopeO89079 Gm42666-201ENSMUST00000201954 152 ntBASIC4.79□□□□□ -1.64
CopeO89079 Gm7825-201ENSMUST00000204046 416 ntBASIC4.79□□□□□ -1.64
CopeO89079 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC4.79□□□□□ -1.64
CopeO89079 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CopeO89079 Gm18904-201ENSMUST00000218756 329 ntBASIC4.79□□□□□ -1.64
CopeO89079 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.79□□□□□ -1.64
CopeO89079 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.79□□□□□ -1.64
CopeO89079 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.79□□□□□ -1.64
CopeO89079 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CopeO89079 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CopeO89079 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CopeO89079 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CopeO89079 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
CopeO89079 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.79□□□□□ -1.64
CopeO89079 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CopeO89079 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CopeO89079 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CopeO89079 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CopeO89079 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.79□□□□□ -1.64
CopeO89079 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.79□□□□□ -1.64
CopeO89079 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
CopeO89079 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CopeO89079 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.78□□□□□ -1.64
CopeO89079 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CopeO89079 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CopeO89079 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.78□□□□□ -1.64
CopeO89079 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.78□□□□□ -1.64
CopeO89079 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CopeO89079 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CopeO89079 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CopeO89079 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.78□□□□□ -1.64
CopeO89079 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.78□□□□□ -1.64
CopeO89079 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.78□□□□□ -1.64
CopeO89079 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms