Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Cx3cl1O35188 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Cx3cl1O35188 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cx3cl1O35188 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Cx3cl1O35188 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cx3cl1O35188 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Cx3cl1O35188 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cx3cl1O35188 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
Cx3cl1O35188 Gm37607-201ENSMUST00000194925 2623 ntBASIC4.56□□□□□ -1.68
Cx3cl1O35188 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Cx3cl1O35188 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.56□□□□□ -1.68
Cx3cl1O35188 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cx3cl1O35188 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Cx3cl1O35188 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC4.55□□□□□ -1.68
Cx3cl1O35188 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.55□□□□□ -1.68
Cx3cl1O35188 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cx3cl1O35188 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cx3cl1O35188 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Cx3cl1O35188 Gm13787-201ENSMUST00000120422 168 ntBASIC4.55□□□□□ -1.68
Cx3cl1O35188 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cx3cl1O35188 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC4.55□□□□□ -1.68
Cx3cl1O35188 Gm24931-201ENSMUST00000158324 107 ntBASIC4.55□□□□□ -1.68
Cx3cl1O35188 Gm24944-201ENSMUST00000158330 128 ntBASIC4.55□□□□□ -1.68
Cx3cl1O35188 Gm16566-201ENSMUST00000160387 910 ntBASIC4.55□□□□□ -1.68
Cx3cl1O35188 Gm3531-201ENSMUST00000162698 489 ntBASIC4.55□□□□□ -1.68
Cx3cl1O35188 Gm8214-201ENSMUST00000172123 351 ntBASIC4.55□□□□□ -1.68
Cx3cl1O35188 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC4.55□□□□□ -1.68
Cx3cl1O35188 Gm28976-201ENSMUST00000188070 144 ntBASIC4.55□□□□□ -1.68
Cx3cl1O35188 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cx3cl1O35188 Gm37682-201ENSMUST00000191776 522 ntBASIC4.55□□□□□ -1.68
Cx3cl1O35188 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC4.55□□□□□ -1.68
Cx3cl1O35188 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.55□□□□□ -1.68
Cx3cl1O35188 Gm42666-201ENSMUST00000201954 152 ntBASIC4.55□□□□□ -1.68
Cx3cl1O35188 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.55□□□□□ -1.68
Cx3cl1O35188 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cx3cl1O35188 Gm8319-201ENSMUST00000205708 641 ntBASIC4.55□□□□□ -1.68
Cx3cl1O35188 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.55□□□□□ -1.68
Cx3cl1O35188 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cx3cl1O35188 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.55□□□□□ -1.68
Cx3cl1O35188 Gm23302-201ENSMUST00000082710 100 ntBASIC4.55□□□□□ -1.68
Cx3cl1O35188 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cx3cl1O35188 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cx3cl1O35188 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.55□□□□□ -1.68
Cx3cl1O35188 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cx3cl1O35188 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cx3cl1O35188 Gm43428-201ENSMUST00000200108 3845 ntBASIC4.55□□□□□ -1.68
Cx3cl1O35188 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Cx3cl1O35188 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cx3cl1O35188 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cx3cl1O35188 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Cx3cl1O35188 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cx3cl1O35188 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cx3cl1O35188 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cx3cl1O35188 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Cx3cl1O35188 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cx3cl1O35188 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cx3cl1O35188 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC4.54□□□□□ -1.68
Cx3cl1O35188 Gm13195-201ENSMUST00000117229 261 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 Gm14930-201ENSMUST00000118864 652 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 Gm13213-201ENSMUST00000119668 474 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cx3cl1O35188 Gm22870-201ENSMUST00000157501 112 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cx3cl1O35188 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cx3cl1O35188 Olfr331-202ENSMUST00000170501 957 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC4.54□□□□□ -1.68
Cx3cl1O35188 Gm9457-201ENSMUST00000180176 372 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 Gm18828-202ENSMUST00000181035 310 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 Gm28097-201ENSMUST00000187333 366 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cx3cl1O35188 Gm36983-201ENSMUST00000192280 1102 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.54□□□□□ -1.68
Cx3cl1O35188 Gm37243-201ENSMUST00000193407 595 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC4.54□□□□□ -1.68
Cx3cl1O35188 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC4.54□□□□□ -1.68
Cx3cl1O35188 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC4.54□□□□□ -1.68
Cx3cl1O35188 Gm43136-201ENSMUST00000200403 636 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 Gm43919-201ENSMUST00000204303 364 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 Supt4b-201ENSMUST00000214434 351 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 AC122295.1-201ENSMUST00000223476 388 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 AC154724.1-201ENSMUST00000225782 821 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cx3cl1O35188 Gm43266-201ENSMUST00000201049 1771 ntBASIC4.54□□□□□ -1.68
Cx3cl1O35188 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cx3cl1O35188 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cx3cl1O35188 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Cx3cl1O35188 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cx3cl1O35188 BC055308-201ENSMUST00000193380 2538 ntBASIC4.53□□□□□ -1.68
Cx3cl1O35188 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cx3cl1O35188 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms