Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Gm42841-201ENSMUST00000199806 1932 ntBASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Gm24117-201ENSMUST00000103973 133 ntBASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Gm24235-201ENSMUST00000104319 129 ntBASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Gm16128-201ENSMUST00000117855 626 ntBASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Gm11366-201ENSMUST00000119279 429 ntBASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Gm25534-201ENSMUST00000175365 125 ntBASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Gm27492-201ENSMUST00000185194 187 ntBASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Gm5511-201ENSMUST00000189380 802 ntBASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Gm2622-201ENSMUST00000200018 471 ntBASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Gm44134-202ENSMUST00000204777 545 ntBASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Gm46191-201ENSMUST00000218899 433 ntBASIC5.06□□□□□ -1.6
Srp54bE9PXC0 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 AC114573.1-201ENSMUST00000224120 1210 ntBASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Srp54bE9PXC0 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Mir292-201ENSMUST00000104847 82 ntBASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Gm15388-201ENSMUST00000121578 726 ntBASIC5.05□□□□□ -1.6
Srp54bE9PXC0 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Gm6632-201ENSMUST00000168425 954 ntBASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 S100a11-ps-201ENSMUST00000181735 306 ntBASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Gm19891-201ENSMUST00000189771 303 ntBASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Gm29011-201ENSMUST00000191059 712 ntBASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Gm44307-201ENSMUST00000204466 764 ntBASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.05□□□□□ -1.6
Srp54bE9PXC0 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.05□□□□□ -1.6
Srp54bE9PXC0 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Gm25134-201ENSMUST00000082646 160 ntBASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Gm25260-201ENSMUST00000083053 134 ntBASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Mir20a-201ENSMUST00000083508 107 ntBASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Srp54bE9PXC0 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.04□□□□□ -1.6
Srp54bE9PXC0 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Srp54bE9PXC0 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Srp54bE9PXC0 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Srp54bE9PXC0 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Srp54bE9PXC0 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Srp54bE9PXC0 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Srp54bE9PXC0 Gm5383-201ENSMUST00000121177 617 ntBASIC5.04□□□□□ -1.6
Srp54bE9PXC0 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC5.04□□□□□ -1.6
Srp54bE9PXC0 Gm12854-201ENSMUST00000128518 297 ntBASIC5.04□□□□□ -1.6
Srp54bE9PXC0 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.04□□□□□ -1.6
Srp54bE9PXC0 Gm25348-201ENSMUST00000158961 111 ntBASIC5.04□□□□□ -1.6
Srp54bE9PXC0 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Srp54bE9PXC0 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC5.04□□□□□ -1.6
Srp54bE9PXC0 V1rg10-201ENSMUST00000183378 937 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms