Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Gm12893-201ENSMUST00000121732 275 ntBASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Gm22940-201ENSMUST00000158560 155 ntBASIC4.8□□□□□ -1.64
H2afb2S4R1M3 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Gm4617-201ENSMUST00000178993 331 ntBASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Gm27543-201ENSMUST00000183562 177 ntBASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Mir7222-201ENSMUST00000183740 75 ntBASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Gm28097-201ENSMUST00000187333 366 ntBASIC4.8□□□□□ -1.64
H2afb2S4R1M3 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Gm8874-201ENSMUST00000196826 286 ntBASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Gm44795-201ENSMUST00000205496 319 ntBASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 AC138284.5-201ENSMUST00000214389 652 ntBASIC4.8□□□□□ -1.64
H2afb2S4R1M3 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 n-R5s173-201ENSMUST00000082620 119 ntBASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Olfr1143-201ENSMUST00000090708 945 ntBASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H2afb2S4R1M3 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.8□□□□□ -1.64
H2afb2S4R1M3 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
H2afb2S4R1M3 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Gm15745-201ENSMUST00000119807 115 ntBASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Gm14619-201ENSMUST00000120480 168 ntBASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Gm13487-201ENSMUST00000122240 864 ntBASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Gm7335-201ENSMUST00000172475 373 ntBASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC4.79□□□□□ -1.64
H2afb2S4R1M3 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Gm37908-201ENSMUST00000195828 470 ntBASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Gm6049-201ENSMUST00000222369 458 ntBASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
H2afb2S4R1M3 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Gm6177-201ENSMUST00000085589 465 ntBASIC4.79□□□□□ -1.64
H2afb2S4R1M3 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
H2afb2S4R1M3 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
H2afb2S4R1M3 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Gm8145-201ENSMUST00000118220 745 ntBASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Gm13333-201ENSMUST00000119424 781 ntBASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Gm14175-201ENSMUST00000119835 241 ntBASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.78□□□□□ -1.64
H2afb2S4R1M3 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Gm26153-201ENSMUST00000157433 127 ntBASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC4.78□□□□□ -1.64
H2afb2S4R1M3 Gm8321-201ENSMUST00000181691 980 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms