Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm23692-201ENSMUST00000101881 160 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm23274-201ENSMUST00000104056 130 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm24170-201ENSMUST00000104124 133 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm24789-201ENSMUST00000104282 131 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Lipe-203ENSMUST00000105177 1251 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm11486-201ENSMUST00000107322 478 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm22468-201ENSMUST00000116680 120 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm26248-201ENSMUST00000116700 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm26137-201ENSMUST00000116701 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm26190-201ENSMUST00000116704 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm24617-201ENSMUST00000116705 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm25778-201ENSMUST00000116713 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm25774-201ENSMUST00000116717 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm22102-201ENSMUST00000116730 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm23177-201ENSMUST00000116784 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm24193-201ENSMUST00000116801 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm24744-201ENSMUST00000116833 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm24427-201ENSMUST00000116896 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm22346-201ENSMUST00000116918 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm23606-201ENSMUST00000116938 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm22029-201ENSMUST00000116940 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm26298-201ENSMUST00000116956 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm23844-201ENSMUST00000116959 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm24484-201ENSMUST00000117009 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm25347-201ENSMUST00000117026 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm22112-201ENSMUST00000117032 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm11912-201ENSMUST00000117235 264 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm14175-201ENSMUST00000119835 241 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm11866-201ENSMUST00000120209 335 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm13484-201ENSMUST00000120738 412 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm12007-201ENSMUST00000120978 597 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm12288-201ENSMUST00000121054 1282 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm14126-201ENSMUST00000122345 395 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm25389-201ENSMUST00000157340 286 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm22857-201ENSMUST00000174969 134 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm22991-201ENSMUST00000178126 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm25754-201ENSMUST00000178653 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm22419-201ENSMUST00000178780 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm24802-201ENSMUST00000178897 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm25208-201ENSMUST00000178964 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm24567-201ENSMUST00000179294 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm23943-201ENSMUST00000179712 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm25228-201ENSMUST00000180121 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm23304-201ENSMUST00000180209 121 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm28353-201ENSMUST00000186482 570 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm28533-201ENSMUST00000186741 570 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm29668-201ENSMUST00000187802 315 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm29148-201ENSMUST00000188140 336 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm43124-201ENSMUST00000201878 278 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm19039-201ENSMUST00000204363 575 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm18899-201ENSMUST00000217663 546 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm3086-202ENSMUST00000221248 310 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 AV026068-224ENSMUST00000224827 928 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 AC163646.1-201ENSMUST00000227704 397 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm23514-201ENSMUST00000082827 130 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm7416-201ENSMUST00000117448 1487 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Trim3Q9R1R2 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.73□□□□□ -1.65
Trim3Q9R1R2 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm33378-201ENSMUST00000219831 2758 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 AC151734.1-201ENSMUST00000227023 1740 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm14086-201ENSMUST00000117152 173 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm11550-201ENSMUST00000118210 699 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 H3f3c-201ENSMUST00000119459 411 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm5699-201ENSMUST00000152491 723 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm23993-201ENSMUST00000157478 144 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm27528-201ENSMUST00000183544 205 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm27688-201ENSMUST00000183634 91 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm27636-201ENSMUST00000184528 122 ntBASIC4.72□□□□□ -1.65
Trim3Q9R1R2 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms