Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Gm25418-201ENSMUST00000104214 129 ntBASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Gm8358-201ENSMUST00000167222 555 ntBASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Gm38150-201ENSMUST00000192996 452 ntBASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Gm37436-201ENSMUST00000193842 1085 ntBASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Gm42437-201ENSMUST00000197263 923 ntBASIC4.73□□□□□ -1.65
Lima1Q9ERG0 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Gm7838-201ENSMUST00000203221 1189 ntBASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Gm18510-201ENSMUST00000219335 1096 ntBASIC4.73□□□□□ -1.65
Lima1Q9ERG0 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 AC121912.1-201ENSMUST00000227525 1201 ntBASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Gm6177-201ENSMUST00000085589 465 ntBASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Gm25821-201ENSMUST00000093657 133 ntBASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Lima1Q9ERG0 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Mir676-201ENSMUST00000102443 89 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Gm8202-201ENSMUST00000117682 310 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Gm7189-201ENSMUST00000119811 429 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Gm15390-201ENSMUST00000120323 738 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Gm14125-202ENSMUST00000120921 756 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Gm11804-201ENSMUST00000121663 468 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Mir6416-201ENSMUST00000183664 117 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Mir7653-201ENSMUST00000184358 61 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Gm18802-201ENSMUST00000186270 888 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Mrgpra14-201ENSMUST00000189782 913 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Gm17953-201ENSMUST00000192061 667 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Igkv3-8-201ENSMUST00000197635 339 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Gm44879-201ENSMUST00000207007 503 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 AC151971.3-201ENSMUST00000214694 404 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Gm7117-201ENSMUST00000071515 387 ntBASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Lima1Q9ERG0 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.71□□□□□ -1.65
Lima1Q9ERG0 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
Lima1Q9ERG0 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
Lima1Q9ERG0 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Lima1Q9ERG0 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Lima1Q9ERG0 Gm29293-201ENSMUST00000189416 2188 ntBASIC4.71□□□□□ -1.65
Lima1Q9ERG0 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 AC122408.2-201ENSMUST00000217901 1391 ntBASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Lima1Q9ERG0 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms