Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Gm44248-201ENSMUST00000203079 1549 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Gm19552-201ENSMUST00000194744 2833 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Gm15185-201ENSMUST00000117397 746 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Gm11781-201ENSMUST00000118328 472 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Gm13755-201ENSMUST00000118509 305 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Gm15981-201ENSMUST00000119196 457 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Gm14603-201ENSMUST00000121275 448 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Gm15022-201ENSMUST00000122074 746 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Gm23837-201ENSMUST00000122656 286 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Ear-ps9-201ENSMUST00000161963 460 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Gm27818-201ENSMUST00000184536 159 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Gm18864-201ENSMUST00000194518 1051 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Gm4290-201ENSMUST00000206897 814 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 AC121986.1-201ENSMUST00000218588 781 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Gm42671-201ENSMUST00000198013 1604 ntBASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdc40Q9DC48 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm22272-201ENSMUST00000104039 134 ntBASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm24160-201ENSMUST00000104594 126 ntBASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm10241-201ENSMUST00000117664 286 ntBASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm26153-201ENSMUST00000157433 127 ntBASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm23700-201ENSMUST00000158842 102 ntBASIC4.62□□□□□ -1.67
Cdc40Q9DC48 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.62□□□□□ -1.67
Cdc40Q9DC48 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm28769-201ENSMUST00000190176 615 ntBASIC4.62□□□□□ -1.67
Cdc40Q9DC48 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm44820-201ENSMUST00000207420 396 ntBASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 AC096628.1-201ENSMUST00000226060 641 ntBASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm23796-201ENSMUST00000084011 160 ntBASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cdc40Q9DC48 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms