Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm25097-201ENSMUST00000104042 145 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm11821-201ENSMUST00000117335 979 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm11877-201ENSMUST00000118921 852 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm11533-201ENSMUST00000120287 477 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm6175-201ENSMUST00000121351 400 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm22959-201ENSMUST00000122514 303 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Hba-ps4-201ENSMUST00000128900 447 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm11197-201ENSMUST00000145158 839 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm22916-201ENSMUST00000157616 119 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm17153-201ENSMUST00000171314 490 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm23872-201ENSMUST00000175432 77 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm6223-201ENSMUST00000178436 871 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm28640-201ENSMUST00000190918 550 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm28872-201ENSMUST00000191518 158 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm37336-202ENSMUST00000193705 468 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm9632-201ENSMUST00000195934 643 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm19060-201ENSMUST00000201959 421 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm10709-201ENSMUST00000213318 480 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm8681-201ENSMUST00000219115 618 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm32526-201ENSMUST00000221878 981 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 AC155314.1-201ENSMUST00000227624 508 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gm43059-201ENSMUST00000202437 1388 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm5073-201ENSMUST00000118222 820 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm11447-201ENSMUST00000118983 858 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm14907-201ENSMUST00000121948 854 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm14253-201ENSMUST00000122112 639 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm12885-201ENSMUST00000122246 328 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm22160-201ENSMUST00000158405 328 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Scarna10-201ENSMUST00000158992 325 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm17511-201ENSMUST00000172206 342 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Mir7082-201ENSMUST00000183526 92 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Mir6244-201ENSMUST00000184156 117 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm27460-201ENSMUST00000184213 100 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm29524-201ENSMUST00000190819 699 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm18748-201ENSMUST00000198507 622 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.9□□□□□ -1.46
Ddx56Q9D0R4 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms