Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm26086-201ENSMUST00000157902 263 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm24359-201ENSMUST00000158418 221 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm24680-201ENSMUST00000158759 126 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm24315-201ENSMUST00000177835 127 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm24969-201ENSMUST00000180331 79 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim13Q9CYB0 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm9114-201ENSMUST00000188558 997 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm37620-201ENSMUST00000192910 501 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm44342-201ENSMUST00000196874 129 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm42621-201ENSMUST00000198114 275 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm44383-201ENSMUST00000198940 129 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm17822-201ENSMUST00000204307 351 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm9278-201ENSMUST00000205508 553 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm18644-201ENSMUST00000211458 815 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim13Q9CYB0 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim13Q9CYB0 CT025680.1-201ENSMUST00000217375 375 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm7753-201ENSMUST00000221007 867 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 AC132954.1-201ENSMUST00000221017 342 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 AC174082.1-201ENSMUST00000221106 307 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim13Q9CYB0 CT030705.2-201ENSMUST00000225301 556 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 CT025552.2-201ENSMUST00000225497 317 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 AC138718.1-201ENSMUST00000225947 1009 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim13Q9CYB0 n-R5s94-201ENSMUST00000082573 119 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm24254-201ENSMUST00000083702 104 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm24490-201ENSMUST00000083803 98 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm25004-201ENSMUST00000083811 161 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 AC162910.1-201ENSMUST00000221219 1723 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.79□□□□□ -1.48
Trim13Q9CYB0 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Gm36962-201ENSMUST00000192114 1761 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Gm7146-201ENSMUST00000116079 739 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Snord88a-201ENSMUST00000116723 90 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Gm14365-201ENSMUST00000117535 587 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Gm14885-201ENSMUST00000117969 496 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Gm15078-201ENSMUST00000118371 782 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Gm15231-201ENSMUST00000119174 447 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Gm14353-201ENSMUST00000122200 869 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Gm23954-201ENSMUST00000157213 353 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Gm20690-201ENSMUST00000177341 315 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Gm28058-201ENSMUST00000186421 264 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Ighv1-21-201ENSMUST00000194856 351 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Gm43383-201ENSMUST00000195981 469 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Gm22711-202ENSMUST00000197029 135 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Gm9245-201ENSMUST00000200528 983 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Gm44794-201ENSMUST00000206550 411 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Gm18559-201ENSMUST00000208249 604 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 CT030030.1-201ENSMUST00000218809 152 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Gm46994-201ENSMUST00000221523 219 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 AC124395.1-201ENSMUST00000225940 707 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 AC157572.1-201ENSMUST00000227187 825 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Trim13Q9CYB0 n-R5s217-201ENSMUST00000083341 116 ntBASIC5.78□□□□□ -1.48
Trim13Q9CYB0 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms