Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 AC153840.1-201ENSMUST00000219685 313 ntBASIC4.73□□□□□ -1.65
Lsm1Q8VC85 Olfr151-202ENSMUST00000221099 929 ntBASIC4.73□□□□□ -1.65
Lsm1Q8VC85 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Lsm1Q8VC85 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
Lsm1Q8VC85 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Lsm1Q8VC85 Gm23459-201ENSMUST00000083259 131 ntBASIC4.73□□□□□ -1.65
Lsm1Q8VC85 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Lsm1Q8VC85 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Lsm1Q8VC85 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Lsm1Q8VC85 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Lsm1Q8VC85 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Lsm1Q8VC85 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.73□□□□□ -1.65
Lsm1Q8VC85 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Lsm1Q8VC85 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gm9429-201ENSMUST00000117804 868 ntBASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gm8129-201ENSMUST00000118230 213 ntBASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gm14601-201ENSMUST00000120892 236 ntBASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gm12752-201ENSMUST00000121657 811 ntBASIC4.72□□□□□ -1.65
Lsm1Q8VC85 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Mir3097-201ENSMUST00000175356 67 ntBASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gm5777-201ENSMUST00000177265 448 ntBASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gm29668-201ENSMUST00000187802 315 ntBASIC4.72□□□□□ -1.65
Lsm1Q8VC85 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gm42824-201ENSMUST00000199361 247 ntBASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gm44485-201ENSMUST00000199569 137 ntBASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gm44776-201ENSMUST00000207212 381 ntBASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.72□□□□□ -1.65
Lsm1Q8VC85 AC121137.1-201ENSMUST00000225272 602 ntBASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gm23330-201ENSMUST00000082660 164 ntBASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.72□□□□□ -1.65
Lsm1Q8VC85 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Lsm1Q8VC85 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.71□□□□□ -1.65
Lsm1Q8VC85 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gm14046-201ENSMUST00000119389 509 ntBASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gm14125-202ENSMUST00000120921 756 ntBASIC4.71□□□□□ -1.66
Lsm1Q8VC85 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gm16259-201ENSMUST00000145241 553 ntBASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gm24216-201ENSMUST00000158259 117 ntBASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gm24931-201ENSMUST00000158324 107 ntBASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gm22261-201ENSMUST00000158691 324 ntBASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gm29356-201ENSMUST00000186935 373 ntBASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gm2497-201ENSMUST00000189539 601 ntBASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gm28389-201ENSMUST00000190090 697 ntBASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gm37884-201ENSMUST00000191857 818 ntBASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Ighv6-2-201ENSMUST00000192430 295 ntBASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gm19231-201ENSMUST00000193212 830 ntBASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gm20770-201ENSMUST00000193474 694 ntBASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gm5842-201ENSMUST00000195073 622 ntBASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.71□□□□□ -1.66
Lsm1Q8VC85 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.71□□□□□ -1.66
Lsm1Q8VC85 AC192333.6-201ENSMUST00000224565 725 ntBASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
Lsm1Q8VC85 Mir504-201ENSMUST00000093602 79 ntBASIC4.71□□□□□ -1.66
Lsm1Q8VC85 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms