Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm37781-201ENSMUST00000194773 3218 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm5583-201ENSMUST00000174328 1519 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm44235-201ENSMUST00000204312 3058 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm44739-201ENSMUST00000205294 1426 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm15754-201ENSMUST00000119191 478 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm15493-201ENSMUST00000119461 528 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm23546-201ENSMUST00000158211 137 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm25839-201ENSMUST00000158921 103 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm37073-201ENSMUST00000192469 1222 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm44988-201ENSMUST00000203835 1161 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm18468-201ENSMUST00000207321 369 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm18470-201ENSMUST00000207467 420 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm18465-201ENSMUST00000207468 369 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm18464-201ENSMUST00000207803 420 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm18458-201ENSMUST00000207908 369 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm18461-201ENSMUST00000208421 420 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 AL772397.1-201ENSMUST00000216707 606 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 AC153801.1-201ENSMUST00000217904 947 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Ube2nl-201ENSMUST00000085228 456 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm38067-201ENSMUST00000192346 1911 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm37964-201ENSMUST00000192459 4905 ntBASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Vps53Q8CCB4 Gm37356-201ENSMUST00000193362 1613 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm19552-201ENSMUST00000194744 2833 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm12287-201ENSMUST00000119770 707 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm15803-201ENSMUST00000120118 394 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm14831-201ENSMUST00000120253 409 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm25430-201ENSMUST00000157614 289 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm3053-201ENSMUST00000161709 616 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Mir7056-201ENSMUST00000183776 59 ntBASIC6.17□□□□□ -1.42
Vps53Q8CCB4 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms