Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm12893-201ENSMUST00000121732 275 ntBASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Gm37485-201ENSMUST00000192326 2953 ntBASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 CT030195.1-201ENSMUST00000223887 378 ntBASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Gm11833-201ENSMUST00000118393 853 ntBASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Gm12897-201ENSMUST00000120341 250 ntBASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Gm24689-201ENSMUST00000157760 104 ntBASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Gm44138-201ENSMUST00000204939 271 ntBASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 AC153494.1-201ENSMUST00000218664 3041 ntBASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 AC139754.3-201ENSMUST00000220444 1627 ntBASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 AC160029.1-201ENSMUST00000219628 2678 ntBASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Gm24792-201ENSMUST00000104286 128 ntBASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Gm10552-201ENSMUST00000113396 372 ntBASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Gm14725-201ENSMUST00000120324 828 ntBASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 AC158779.2-201ENSMUST00000227902 1947 ntBASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col6a6Q8C6K9 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Trbv9-201ENSMUST00000194494 290 ntBASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 AC124579.1-201ENSMUST00000223468 2520 ntBASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Gm19113-201ENSMUST00000217552 1828 ntBASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 AC107645.1-201ENSMUST00000228660 1810 ntBASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Gm14082-201ENSMUST00000118582 801 ntBASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Gm6079-201ENSMUST00000121356 404 ntBASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Gm12752-201ENSMUST00000121657 811 ntBASIC4.25□□□□□ -1.73
Col6a6Q8C6K9 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms