Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Gm25669-201ENSMUST00000157699 112 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Gm23473-201ENSMUST00000158883 116 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Ear-ps9-201ENSMUST00000161963 460 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Mir5107-201ENSMUST00000175586 88 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Gm20701-201ENSMUST00000176082 347 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Gm27428-201ENSMUST00000184289 110 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Gm28885-201ENSMUST00000185615 563 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Gm37501-201ENSMUST00000192830 691 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Ighv1-45-201ENSMUST00000193677 352 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Gm3321-201ENSMUST00000200603 1129 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Gm44046-201ENSMUST00000203145 2678 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Gm18103-201ENSMUST00000216621 779 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 AC156559.2-201ENSMUST00000224403 384 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 AC154563.1-201ENSMUST00000228317 442 ntBASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim47Q8C0E3 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 AC161247.1-201ENSMUST00000217744 2295 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 AC158938.1-201ENSMUST00000225372 6720 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 AC156636.1-201ENSMUST00000218639 2229 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm42520-201ENSMUST00000199642 1502 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 AC139758.3-201ENSMUST00000226853 2704 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm24272-201ENSMUST00000102329 98 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm25879-201ENSMUST00000104330 107 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm12565-201ENSMUST00000119004 649 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm16511-201ENSMUST00000120019 564 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Llph-ps2-201ENSMUST00000122000 393 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm23903-201ENSMUST00000157566 131 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm23894-201ENSMUST00000158107 313 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm23343-201ENSMUST00000158964 143 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm16101-201ENSMUST00000160695 430 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm22548-201ENSMUST00000174899 78 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm29385-201ENSMUST00000186831 363 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm28951-201ENSMUST00000190742 313 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm28408-201ENSMUST00000191557 463 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm45448-201ENSMUST00000211739 209 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 AC160863.1-201ENSMUST00000218412 317 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm28392-201ENSMUST00000077630 393 ntBASIC7.13□□□□□ -1.27
Trim47Q8C0E3 Gm22351-201ENSMUST00000083925 107 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms