Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Gm3531-201ENSMUST00000162698 489 ntBASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Gm29596-201ENSMUST00000185710 385 ntBASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.88□□□□□ -1.63
Trub1Q8C0D0 AC127279.1-201ENSMUST00000220140 637 ntBASIC4.88□□□□□ -1.63
Trub1Q8C0D0 AC159622.1-201ENSMUST00000221004 554 ntBASIC4.88□□□□□ -1.63
Trub1Q8C0D0 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC4.88□□□□□ -1.63
Trub1Q8C0D0 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Snora52-201ENSMUST00000082732 137 ntBASIC4.88□□□□□ -1.63
Trub1Q8C0D0 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
Trub1Q8C0D0 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Trub1Q8C0D0 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Gm24124-201ENSMUST00000104103 132 ntBASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Gm14587-201ENSMUST00000121714 658 ntBASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Gm11759-201ENSMUST00000121742 464 ntBASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Gm28660-201ENSMUST00000186496 253 ntBASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Gm17775-201ENSMUST00000198542 258 ntBASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Gm9057-201ENSMUST00000198791 296 ntBASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Gm5284-201ENSMUST00000199053 903 ntBASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Gm44779-201ENSMUST00000206937 708 ntBASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 AC154296.3-201ENSMUST00000214427 712 ntBASIC4.87□□□□□ -1.63
Trub1Q8C0D0 AC112142.1-206ENSMUST00000228136 982 ntBASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Gm10705-201ENSMUST00000098980 461 ntBASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.87□□□□□ -1.63
Trub1Q8C0D0 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Lipe-203ENSMUST00000105177 1251 ntBASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Gm15297-201ENSMUST00000117795 290 ntBASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Gm14909-201ENSMUST00000117853 351 ntBASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Gm12231-201ENSMUST00000119447 695 ntBASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Gm15171-201ENSMUST00000122191 334 ntBASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Trub1Q8C0D0 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.86□□□□□ -1.63
Trub1Q8C0D0 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Gm25383-201ENSMUST00000157810 144 ntBASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Gm22383-201ENSMUST00000158188 327 ntBASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Gm17046-201ENSMUST00000168078 850 ntBASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Gm3145-201ENSMUST00000188584 220 ntBASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Gm8874-201ENSMUST00000196826 286 ntBASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.86□□□□□ -1.63
Trub1Q8C0D0 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.86□□□□□ -1.63
Trub1Q8C0D0 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Gm23456-201ENSMUST00000083335 137 ntBASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.86□□□□□ -1.63
Trub1Q8C0D0 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms