Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Gm24789-201ENSMUST00000104282 131 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Gm6893-201ENSMUST00000118385 522 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Gm13172-201ENSMUST00000118685 256 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Gm11742-201ENSMUST00000119903 233 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Gm15791-201ENSMUST00000120365 319 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Gm25966-201ENSMUST00000157169 117 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Gm24441-201ENSMUST00000157235 281 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Gm23993-201ENSMUST00000157478 144 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Gm24664-201ENSMUST00000158939 100 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Gm27688-201ENSMUST00000183634 91 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Gm28923-201ENSMUST00000187755 322 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Gm44281-201ENSMUST00000203090 166 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Gm45710-201ENSMUST00000212847 215 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Gm45908-201ENSMUST00000212977 1177 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 AC154510.1-201ENSMUST00000223925 737 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 n-R5s36-201ENSMUST00000082998 119 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Gm25260-201ENSMUST00000083053 134 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Mir449a-201ENSMUST00000083641 91 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm24429-201ENSMUST00000104076 132 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm14086-201ENSMUST00000117152 173 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm15779-201ENSMUST00000117470 412 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm12261-201ENSMUST00000117499 645 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm8129-201ENSMUST00000118230 213 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm5133-201ENSMUST00000118940 1255 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm13503-201ENSMUST00000119017 446 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm14871-201ENSMUST00000119056 194 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm13367-201ENSMUST00000119955 796 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm15194-201ENSMUST00000120453 434 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm15267-201ENSMUST00000120888 464 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm12007-201ENSMUST00000120978 597 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm6542-201ENSMUST00000153606 772 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm25907-201ENSMUST00000158486 125 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm20401-201ENSMUST00000173717 212 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm27225-201ENSMUST00000183833 557 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm36997-201ENSMUST00000195090 707 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm37490-201ENSMUST00000195566 724 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 AC121804.1-201ENSMUST00000221016 394 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm22971-201ENSMUST00000083305 97 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc40Q8BI79 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ccdc40Q8BI79 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms