Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm14304-201ENSMUST00000117272 446 ntBASIC5.55□□□□□ -1.52
Nup98Q6PFD9 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Gm4134-201ENSMUST00000173244 563 ntBASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Gm43580-201ENSMUST00000202892 284 ntBASIC5.55□□□□□ -1.52
Nup98Q6PFD9 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Gm7269-201ENSMUST00000210819 1373 ntBASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Nup98Q6PFD9 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Nup98Q6PFD9 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Nup98Q6PFD9 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nup98Q6PFD9 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nup98Q6PFD9 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Nup98Q6PFD9 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nup98Q6PFD9 Gm15603-201ENSMUST00000119252 492 ntBASIC5.54□□□□□ -1.52
Nup98Q6PFD9 Gm13220-201ENSMUST00000121535 508 ntBASIC5.54□□□□□ -1.52
Nup98Q6PFD9 Gm9294-201ENSMUST00000165198 789 ntBASIC5.54□□□□□ -1.52
Nup98Q6PFD9 Gm5372-201ENSMUST00000187540 409 ntBASIC5.54□□□□□ -1.52
Nup98Q6PFD9 Gm29793-201ENSMUST00000202874 460 ntBASIC5.54□□□□□ -1.52
Nup98Q6PFD9 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.54□□□□□ -1.52
Nup98Q6PFD9 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.54□□□□□ -1.52
Nup98Q6PFD9 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Nup98Q6PFD9 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.54□□□□□ -1.52
Nup98Q6PFD9 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nup98Q6PFD9 n-R5s7-201ENSMUST00000083755 121 ntBASIC5.54□□□□□ -1.52
Nup98Q6PFD9 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.54□□□□□ -1.52
Nup98Q6PFD9 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Nup98Q6PFD9 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nup98Q6PFD9 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Nup98Q6PFD9 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Gm43870-201ENSMUST00000205102 4369 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Gm14784-201ENSMUST00000121604 663 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Gm25427-201ENSMUST00000157605 103 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Mir7222-201ENSMUST00000183740 75 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Gm27940-201ENSMUST00000184449 98 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Gm28859-201ENSMUST00000186650 616 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Gm2059-201ENSMUST00000212025 287 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 AV026068-220ENSMUST00000224153 1147 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 AV026068-224ENSMUST00000224827 928 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Gm43990-201ENSMUST00000203790 1691 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Gm22119-201ENSMUST00000175594 99 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Gm27037-201ENSMUST00000182270 960 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Mir3620-201ENSMUST00000184710 61 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Gm10988-201ENSMUST00000209150 1088 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Mir383-201ENSMUST00000083523 70 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Nup98Q6PFD9 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Nup98Q6PFD9 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nup98Q6PFD9 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.52□□□□□ -1.53
Nup98Q6PFD9 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nup98Q6PFD9 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nup98Q6PFD9 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.52□□□□□ -1.53
Nup98Q6PFD9 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nup98Q6PFD9 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.52□□□□□ -1.53
Nup98Q6PFD9 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.52□□□□□ -1.53
Nup98Q6PFD9 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Nup98Q6PFD9 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Nup98Q6PFD9 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nup98Q6PFD9 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.52□□□□□ -1.53
Nup98Q6PFD9 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
Nup98Q6PFD9 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.52□□□□□ -1.53
Nup98Q6PFD9 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.52□□□□□ -1.53
Nup98Q6PFD9 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms