Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm7146-201ENSMUST00000116079 739 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm16394-201ENSMUST00000117289 675 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm15988-201ENSMUST00000118677 367 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm7071-201ENSMUST00000120458 462 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm11965-201ENSMUST00000122017 277 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm13368-201ENSMUST00000122443 430 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm26211-201ENSMUST00000158578 129 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm23028-201ENSMUST00000158773 265 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm17142-201ENSMUST00000164933 645 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm3242-201ENSMUST00000171273 485 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm6155-201ENSMUST00000173735 341 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm22701-201ENSMUST00000175371 291 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm23450-201ENSMUST00000178285 91 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm37203-201ENSMUST00000191618 385 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm18340-201ENSMUST00000196342 609 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm44409-201ENSMUST00000198810 166 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm43054-201ENSMUST00000199495 884 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm43233-201ENSMUST00000200491 616 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm6070-201ENSMUST00000207275 419 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm7751-201ENSMUST00000212868 709 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 AC160999.1-201ENSMUST00000225675 810 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 AC122858.1-201ENSMUST00000226212 433 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm23407-201ENSMUST00000082538 91 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm10540-201ENSMUST00000097581 276 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm26996-201ENSMUST00000204418 1359 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm42755-201ENSMUST00000198533 1493 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Snora35-201ENSMUST00000104579 128 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm13835-201ENSMUST00000118459 685 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm8855-201ENSMUST00000118888 878 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm9005-201ENSMUST00000119908 607 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm15786-201ENSMUST00000121079 450 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm14638-201ENSMUST00000121338 216 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm11879-201ENSMUST00000121885 702 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm8121-201ENSMUST00000153583 499 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm26410-201ENSMUST00000157670 261 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm23896-201ENSMUST00000158109 130 ntBASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sh3rf1Q69ZI1 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms