Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm29640-201ENSMUST00000187972 278 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm28957-201ENSMUST00000190174 373 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm43144-201ENSMUST00000198256 485 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm32526-201ENSMUST00000221878 981 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm9309-201ENSMUST00000223537 546 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 AC183092.2-201ENSMUST00000225542 1153 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm5471-201ENSMUST00000072732 337 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC7.87□□□□□ -1.15
Col17a1Q07563 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Col17a1Q07563 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm3563-201ENSMUST00000172963 1628 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col17a1Q07563 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Col17a1Q07563 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col17a1Q07563 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col17a1Q07563 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Col17a1Q07563 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col17a1Q07563 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col17a1Q07563 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col17a1Q07563 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col17a1Q07563 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col17a1Q07563 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm37621-201ENSMUST00000194716 5531 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col17a1Q07563 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col17a1Q07563 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm24987-201ENSMUST00000104453 134 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm11270-201ENSMUST00000117685 471 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm12697-201ENSMUST00000118008 667 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm15012-201ENSMUST00000119176 106 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Defa-ps11-201ENSMUST00000119719 299 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm14687-201ENSMUST00000120206 363 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm15390-201ENSMUST00000120323 738 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col17a1Q07563 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC7.87□□□□□ -1.15
Col17a1Q07563 Mir1945-201ENSMUST00000157919 78 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm43774-201ENSMUST00000196327 878 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm5885-202ENSMUST00000203357 528 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col17a1Q07563 AC153646.1-201ENSMUST00000223229 1279 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 AC164883.9-201ENSMUST00000228042 399 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm5321-201ENSMUST00000072050 447 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm44660-201ENSMUST00000207134 2465 ntBASIC7.86□□□□□ -1.15
Col17a1Q07563 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col17a1Q07563 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col17a1Q07563 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC7.86□□□□□ -1.15
Col17a1Q07563 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC7.86□□□□□ -1.15
Col17a1Q07563 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Col17a1Q07563 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col17a1Q07563 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Col17a1Q07563 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col17a1Q07563 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col17a1Q07563 Gm23593-201ENSMUST00000104309 120 ntBASIC7.86□□□□□ -1.15
Col17a1Q07563 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC7.86□□□□□ -1.15
Col17a1Q07563 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC7.86□□□□□ -1.15
Col17a1Q07563 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC7.86□□□□□ -1.15
Col17a1Q07563 Gm23228-201ENSMUST00000157296 270 ntBASIC7.86□□□□□ -1.15
Col17a1Q07563 Gm22011-201ENSMUST00000158790 123 ntBASIC7.86□□□□□ -1.15
Col17a1Q07563 Gm6872-201ENSMUST00000165001 700 ntBASIC7.86□□□□□ -1.15
Col17a1Q07563 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
Col17a1Q07563 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC7.86□□□□□ -1.15
Col17a1Q07563 Gm29228-201ENSMUST00000185489 418 ntBASIC7.86□□□□□ -1.15
Col17a1Q07563 Gm5268-201ENSMUST00000189212 940 ntBASIC7.86□□□□□ -1.15
Col17a1Q07563 Gm37700-201ENSMUST00000192617 965 ntBASIC7.86□□□□□ -1.15
Col17a1Q07563 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC7.86□□□□□ -1.15
Col17a1Q07563 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC7.86□□□□□ -1.15
Col17a1Q07563 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC7.86□□□□□ -1.15
Col17a1Q07563 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC7.86□□□□□ -1.15
Col17a1Q07563 Gm5338-201ENSMUST00000209530 639 ntBASIC7.86□□□□□ -1.15
Col17a1Q07563 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC7.86□□□□□ -1.15
Col17a1Q07563 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Col17a1Q07563 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Col17a1Q07563 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC7.86□□□□□ -1.15
Col17a1Q07563 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col17a1Q07563 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Col17a1Q07563 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Col17a1Q07563 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC7.85□□□□□ -1.15
Col17a1Q07563 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Col17a1Q07563 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.85□□□□□ -1.15
Col17a1Q07563 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Col17a1Q07563 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Col17a1Q07563 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Col17a1Q07563 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Col17a1Q07563 AC126673.1-201ENSMUST00000223208 3856 ntBASIC7.85□□□□□ -1.15
Col17a1Q07563 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Col17a1Q07563 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Col17a1Q07563 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Col17a1Q07563 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Col17a1Q07563 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Col17a1Q07563 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC7.85□□□□□ -1.15
Col17a1Q07563 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC7.85□□□□□ -1.15
Col17a1Q07563 Gm25317-201ENSMUST00000116824 129 ntBASIC7.85□□□□□ -1.15
Col17a1Q07563 Gm12423-201ENSMUST00000118334 135 ntBASIC7.85□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms