Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sox9Q04887 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox9Q04887 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC6.02□□□□□ -1.44
Sox9Q04887 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC6.02□□□□□ -1.44
Sox9Q04887 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.02□□□□□ -1.44
Sox9Q04887 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
Sox9Q04887 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox9Q04887 Gm37936-201ENSMUST00000194647 1322 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Sox9Q04887 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sox9Q04887 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox9Q04887 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox9Q04887 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox9Q04887 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sox9Q04887 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox9Q04887 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.02□□□□□ -1.45
Sox9Q04887 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Gm15659-201ENSMUST00000118881 341 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Gm15785-201ENSMUST00000119145 694 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Gm15193-201ENSMUST00000120224 865 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Gm13484-201ENSMUST00000120738 412 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Gm5383-201ENSMUST00000121177 617 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Gm15141-201ENSMUST00000121860 729 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Gm15367-201ENSMUST00000122398 1016 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox9Q04887 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.02□□□□□ -1.45
Sox9Q04887 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC6.02□□□□□ -1.45
Sox9Q04887 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox9Q04887 Gm22793-201ENSMUST00000157227 330 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Gm17085-201ENSMUST00000165425 502 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Gm18417-201ENSMUST00000176564 648 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox9Q04887 Gm18356-201ENSMUST00000185677 623 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Gm29263-201ENSMUST00000188718 463 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox9Q04887 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox9Q04887 Gm18407-201ENSMUST00000192126 790 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Gm43556-201ENSMUST00000196186 681 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC6.02□□□□□ -1.45
Sox9Q04887 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC6.02□□□□□ -1.45
Sox9Q04887 Gm44219-201ENSMUST00000203005 273 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Gm44259-201ENSMUST00000204996 298 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.02□□□□□ -1.45
Sox9Q04887 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox9Q04887 Gm21112-201ENSMUST00000212224 578 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Gm7760-201ENSMUST00000212265 578 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Gm7807-201ENSMUST00000212475 578 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 AC153505.2-201ENSMUST00000217741 277 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC6.02□□□□□ -1.45
Sox9Q04887 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sox9Q04887 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox9Q04887 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sox9Q04887 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC6.02□□□□□ -1.45
Sox9Q04887 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sox9Q04887 Mir449a-201ENSMUST00000083641 91 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sox9Q04887 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox9Q04887 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox9Q04887 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox9Q04887 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sox9Q04887 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox9Q04887 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sox9Q04887 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox9Q04887 Gm45183-201ENSMUST00000207937 1497 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Robo2-210ENSMUST00000226478 8059 ntBASIC6.02□□□□□ -1.45
Sox9Q04887 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Sox9Q04887 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox9Q04887 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Sox9Q04887 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sox9Q04887 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sox9Q04887 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.01□□□□□ -1.45
Sox9Q04887 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.01□□□□□ -1.45
Sox9Q04887 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox9Q04887 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.01□□□□□ -1.45
Sox9Q04887 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
Sox9Q04887 Mir678-201ENSMUST00000102114 84 ntBASIC6.01□□□□□ -1.45
Sox9Q04887 Gm12520-201ENSMUST00000117493 316 ntBASIC6.01□□□□□ -1.45
Sox9Q04887 Gm8475-201ENSMUST00000118211 526 ntBASIC6.01□□□□□ -1.45
Sox9Q04887 Gm13755-201ENSMUST00000118509 305 ntBASIC6.01□□□□□ -1.45
Sox9Q04887 Gm11972-201ENSMUST00000118514 389 ntBASIC6.01□□□□□ -1.45
Sox9Q04887 Gm7927-201ENSMUST00000118818 880 ntBASIC6.01□□□□□ -1.45
Sox9Q04887 Gm13866-201ENSMUST00000118901 968 ntBASIC6.01□□□□□ -1.45
Sox9Q04887 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.01□□□□□ -1.45
Sox9Q04887 Gm15428-201ENSMUST00000121352 333 ntBASIC6.01□□□□□ -1.45
Sox9Q04887 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC6.01□□□□□ -1.45
Sox9Q04887 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox9Q04887 Gm24969-201ENSMUST00000180331 79 ntBASIC6.01□□□□□ -1.45
Sox9Q04887 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC6.01□□□□□ -1.45
Sox9Q04887 Gm33952-201ENSMUST00000197795 408 ntBASIC6.01□□□□□ -1.45
Sox9Q04887 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC6.01□□□□□ -1.45
Sox9Q04887 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC6.01□□□□□ -1.45
Sox9Q04887 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC6.01□□□□□ -1.45
Sox9Q04887 Supt4b-201ENSMUST00000214434 351 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms