Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx2Q03358 Gm23345-201ENSMUST00000083817 150 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.86□□□□□ -1.47
Msx2Q03358 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Msx2Q03358 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Msx2Q03358 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.86□□□□□ -1.47
Msx2Q03358 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx2Q03358 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx2Q03358 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Msx2Q03358 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Msx2Q03358 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx2Q03358 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx2Q03358 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Msx2Q03358 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msx2Q03358 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msx2Q03358 CT009757.4-201ENSMUST00000221520 2541 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msx2Q03358 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Gm5594-201ENSMUST00000172712 1429 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
Msx2Q03358 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msx2Q03358 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Msx2Q03358 Mir466i-201ENSMUST00000116924 121 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Gm14670-201ENSMUST00000117327 337 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Gm15312-201ENSMUST00000118827 271 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Gm6664-201ENSMUST00000119138 468 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Gm14998-201ENSMUST00000120502 495 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Gm12399-201ENSMUST00000121475 446 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Gm15309-201ENSMUST00000121644 240 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Gm22478-201ENSMUST00000122570 154 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Gm20453-201ENSMUST00000173968 226 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC5.85□□□□□ -1.47
Msx2Q03358 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC5.85□□□□□ -1.47
Msx2Q03358 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.85□□□□□ -1.47
Msx2Q03358 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.85□□□□□ -1.47
Msx2Q03358 Gm24315-201ENSMUST00000177835 127 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Msx2Q03358 Gm17777-201ENSMUST00000189740 1276 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Gm44361-201ENSMUST00000197960 94 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Gm44254-201ENSMUST00000204184 322 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.85□□□□□ -1.47
Msx2Q03358 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.85□□□□□ -1.47
Msx2Q03358 Gm7943-201ENSMUST00000212078 1034 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 AC155929.1-201ENSMUST00000220217 1276 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Gm7045-201ENSMUST00000221466 605 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 AC167140.1-201ENSMUST00000224710 403 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 AC144798.1-201ENSMUST00000228120 391 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Msx2Q03358 Gm15732-201ENSMUST00000079794 480 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Gm25079-201ENSMUST00000082529 203 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Msx2Q03358 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msx2Q03358 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Msx2Q03358 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Msx2Q03358 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.85□□□□□ -1.47
Msx2Q03358 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Msx2Q03358 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Msx2Q03358 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Msx2Q03358 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Msx2Q03358 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Msx2Q03358 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.85□□□□□ -1.47
Msx2Q03358 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.85□□□□□ -1.47
Msx2Q03358 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Msx2Q03358 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msx2Q03358 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msx2Q03358 Gm43719-201ENSMUST00000200088 2199 ntBASIC5.84□□□□□ -1.47
Msx2Q03358 Gm44288-201ENSMUST00000205061 2795 ntBASIC5.84□□□□□ -1.47
Msx2Q03358 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msx2Q03358 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Msx2Q03358 Gm37630-201ENSMUST00000194210 1456 ntBASIC5.84□□□□□ -1.47
Msx2Q03358 Gm15095-201ENSMUST00000118996 1430 ntBASIC5.84□□□□□ -1.47
Msx2Q03358 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msx2Q03358 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msx2Q03358 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.84□□□□□ -1.47
Msx2Q03358 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Msx2Q03358 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Msx2Q03358 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Msx2Q03358 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.84□□□□□ -1.47
Msx2Q03358 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Msx2Q03358 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.84□□□□□ -1.47
Msx2Q03358 Gm9144-201ENSMUST00000101625 1008 ntBASIC5.84□□□□□ -1.47
Msx2Q03358 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Msx2Q03358 Gm23527-201ENSMUST00000104570 130 ntBASIC5.84□□□□□ -1.47
Msx2Q03358 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC5.84□□□□□ -1.47
Msx2Q03358 Gm7146-201ENSMUST00000116079 739 ntBASIC5.84□□□□□ -1.47
Msx2Q03358 Gm25111-201ENSMUST00000116686 147 ntBASIC5.84□□□□□ -1.47
Msx2Q03358 Mir467h-201ENSMUST00000116759 121 ntBASIC5.84□□□□□ -1.47
Msx2Q03358 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC5.84□□□□□ -1.47
Msx2Q03358 Gm5793-201ENSMUST00000119393 630 ntBASIC5.84□□□□□ -1.47
Msx2Q03358 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC5.84□□□□□ -1.47
Msx2Q03358 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC5.84□□□□□ -1.47
Msx2Q03358 Gm15141-201ENSMUST00000121860 729 ntBASIC5.84□□□□□ -1.47
Msx2Q03358 Gm12540-201ENSMUST00000121938 319 ntBASIC5.84□□□□□ -1.47
Msx2Q03358 Gm16330-201ENSMUST00000128324 297 ntBASIC5.84□□□□□ -1.47
Msx2Q03358 Gm15899-201ENSMUST00000128586 238 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms