Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.21□□□□□ -1.9
PrkdcP97313 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PrkdcP97313 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PrkdcP97313 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PrkdcP97313 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PrkdcP97313 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PrkdcP97313 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC3.2□□□□□ -1.9
PrkdcP97313 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PrkdcP97313 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PrkdcP97313 AC183268.1-201ENSMUST00000215753 2837 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC3.2□□□□□ -1.9
PrkdcP97313 Gm22936-201ENSMUST00000103955 126 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC3.2□□□□□ -1.9
PrkdcP97313 Gm14711-201ENSMUST00000117056 217 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Gm12379-201ENSMUST00000119607 391 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC3.2□□□□□ -1.9
PrkdcP97313 Gm25264-201ENSMUST00000158519 117 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Gm4479-201ENSMUST00000178807 171 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Gm45156-201ENSMUST00000207255 439 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PrkdcP97313 Gm45499-201ENSMUST00000211656 280 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PrkdcP97313 Snora7a-201ENSMUST00000082629 140 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PrkdcP97313 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PrkdcP97313 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PrkdcP97313 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PrkdcP97313 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PrkdcP97313 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PrkdcP97313 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PrkdcP97313 Gm8674-201ENSMUST00000179367 3047 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PrkdcP97313 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PrkdcP97313 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
PrkdcP97313 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
PrkdcP97313 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PrkdcP97313 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PrkdcP97313 Gm26350-201ENSMUST00000157531 288 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Gm25907-201ENSMUST00000158486 125 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Gm19739-201ENSMUST00000195941 153 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Gm43044-201ENSMUST00000198091 379 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PrkdcP97313 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PrkdcP97313 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.2□□□□□ -1.9
PrkdcP97313 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC3.2□□□□□ -1.9
PrkdcP97313 Gm6043-201ENSMUST00000099961 492 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PrkdcP97313 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.2□□□□□ -1.9
PrkdcP97313 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
PrkdcP97313 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PrkdcP97313 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PrkdcP97313 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PrkdcP97313 Gm37115-201ENSMUST00000193750 2849 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PrkdcP97313 AC124579.1-201ENSMUST00000223468 2520 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Gm25833-201ENSMUST00000104137 133 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Gm14212-201ENSMUST00000122023 826 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PrkdcP97313 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
PrkdcP97313 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC3.2□□□□□ -1.9
PrkdcP97313 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PrkdcP97313 Fam107b-209ENSMUST00000226435 3602 ntBASIC3.2□□□□□ -1.9
PrkdcP97313 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PrkdcP97313 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Gm38218-201ENSMUST00000193555 4689 ntBASIC3.19□□□□□ -1.9
PrkdcP97313 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC3.19□□□□□ -1.9
PrkdcP97313 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PrkdcP97313 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PrkdcP97313 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Gm9577-201ENSMUST00000174655 2620 ntBASIC3.19□□□□□ -1.9
PrkdcP97313 Gm12752-201ENSMUST00000121657 811 ntBASIC3.19□□□□□ -1.9
PrkdcP97313 Gm29489-201ENSMUST00000188934 324 ntBASIC3.19□□□□□ -1.9
PrkdcP97313 Gm37636-201ENSMUST00000193583 359 ntBASIC3.19□□□□□ -1.9
PrkdcP97313 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC3.19□□□□□ -1.9
PrkdcP97313 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC3.19□□□□□ -1.9
PrkdcP97313 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PrkdcP97313 Gm22739-201ENSMUST00000083437 160 ntBASIC3.19□□□□□ -1.9
PrkdcP97313 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Gm13712-201ENSMUST00000117484 2295 ntBASIC3.19□□□□□ -1.9
PrkdcP97313 AC113059.3-201ENSMUST00000217423 2777 ntBASIC3.19□□□□□ -1.9
PrkdcP97313 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Gm43088-201ENSMUST00000197530 2347 ntBASIC3.19□□□□□ -1.9
PrkdcP97313 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PrkdcP97313 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PrkdcP97313 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PrkdcP97313 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PrkdcP97313 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC3.19□□□□□ -1.9
PrkdcP97313 Gm22320-201ENSMUST00000157149 312 ntBASIC3.19□□□□□ -1.9
PrkdcP97313 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PrkdcP97313 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms