Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 Gm29105-201ENSMUST00000187256 450 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Gm5116-201ENSMUST00000187732 463 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Gm29627-201ENSMUST00000187984 463 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Gm29524-201ENSMUST00000190819 699 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Gm23011-202ENSMUST00000197855 275 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC5.78□□□□□ -1.48
SgcbP82349 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SgcbP82349 Gm7780-201ENSMUST00000214787 406 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SgcbP82349 AC117769.2-201ENSMUST00000224612 469 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Olfr1193-201ENSMUST00000081697 957 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC5.78□□□□□ -1.48
SgcbP82349 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 Gm33167-201ENSMUST00000201933 2643 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SgcbP82349 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SgcbP82349 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SgcbP82349 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SgcbP82349 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SgcbP82349 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SgcbP82349 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SgcbP82349 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SgcbP82349 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SgcbP82349 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SgcbP82349 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SgcbP82349 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SgcbP82349 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SgcbP82349 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SgcbP82349 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SgcbP82349 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
SgcbP82349 Mir449c-201ENSMUST00000102192 109 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SgcbP82349 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SgcbP82349 Gm22656-201ENSMUST00000104199 171 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SgcbP82349 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Gm13176-201ENSMUST00000117910 477 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Gm15387-201ENSMUST00000120421 648 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Gm15750-201ENSMUST00000120970 616 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Gm11472-201ENSMUST00000121305 556 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Gm13220-201ENSMUST00000121535 508 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Gm12267-201ENSMUST00000121609 761 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.77□□□□□ -1.49
SgcbP82349 Gm11197-201ENSMUST00000145158 839 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC5.77□□□□□ -1.49
SgcbP82349 Gm26352-201ENSMUST00000158223 125 ntBASIC5.77□□□□□ -1.49
SgcbP82349 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SgcbP82349 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC5.77□□□□□ -1.49
SgcbP82349 Gm26381-201ENSMUST00000174895 92 ntBASIC5.77□□□□□ -1.49
SgcbP82349 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SgcbP82349 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Gm26509-201ENSMUST00000180947 948 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SgcbP82349 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC5.77□□□□□ -1.49
SgcbP82349 Gm38050-201ENSMUST00000191904 238 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Gm37164-201ENSMUST00000192809 637 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Gm5842-201ENSMUST00000195073 622 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Gm44373-201ENSMUST00000196112 169 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Ighv1-83-201ENSMUST00000199643 351 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Gm5551-201ENSMUST00000199720 690 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SgcbP82349 AC162931.1-201ENSMUST00000214184 267 ntBASIC5.77□□□□□ -1.49
SgcbP82349 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SgcbP82349 AC163646.1-201ENSMUST00000227704 397 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Gm23623-201ENSMUST00000082461 107 ntBASIC5.77□□□□□ -1.49
SgcbP82349 n-R5s56-201ENSMUST00000082521 105 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Gm23093-201ENSMUST00000083450 102 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Gm5518-201ENSMUST00000084171 648 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Gm37761-201ENSMUST00000194989 2098 ntBASIC5.77□□□□□ -1.49
SgcbP82349 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SgcbP82349 AC126549.1-201ENSMUST00000225044 3687 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
SgcbP82349 AC139758.3-201ENSMUST00000226853 2704 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SgcbP82349 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SgcbP82349 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SgcbP82349 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SgcbP82349 AC138284.1-201ENSMUST00000214258 3236 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SgcbP82349 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC5.77□□□□□ -1.49
SgcbP82349 Gm45457-201ENSMUST00000209931 3089 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SgcbP82349 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SgcbP82349 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.77□□□□□ -1.49
SgcbP82349 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SgcbP82349 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SgcbP82349 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms