Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CiitaP79621 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CiitaP79621 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CiitaP79621 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.55□□□□□ -1.52
CiitaP79621 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
CiitaP79621 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CiitaP79621 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CiitaP79621 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CiitaP79621 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CiitaP79621 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CiitaP79621 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CiitaP79621 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
CiitaP79621 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
CiitaP79621 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CiitaP79621 Gm12131-201ENSMUST00000117479 359 ntBASIC5.54□□□□□ -1.52
CiitaP79621 Gm8202-201ENSMUST00000117682 310 ntBASIC5.54□□□□□ -1.52
CiitaP79621 Gm11971-201ENSMUST00000117715 288 ntBASIC5.54□□□□□ -1.52
CiitaP79621 Gm12444-201ENSMUST00000121512 877 ntBASIC5.54□□□□□ -1.52
CiitaP79621 Gm14840-201ENSMUST00000122135 594 ntBASIC5.54□□□□□ -1.52
CiitaP79621 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CiitaP79621 Gm23327-201ENSMUST00000157420 78 ntBASIC5.54□□□□□ -1.52
CiitaP79621 Gm23534-201ENSMUST00000157539 97 ntBASIC5.54□□□□□ -1.52
CiitaP79621 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CiitaP79621 Gm27820-201ENSMUST00000183628 175 ntBASIC5.54□□□□□ -1.52
CiitaP79621 Gm28468-201ENSMUST00000188536 615 ntBASIC5.54□□□□□ -1.52
CiitaP79621 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.54□□□□□ -1.52
CiitaP79621 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.54□□□□□ -1.52
CiitaP79621 Gm38011-201ENSMUST00000193312 279 ntBASIC5.54□□□□□ -1.52
CiitaP79621 Gm37319-201ENSMUST00000193500 636 ntBASIC5.54□□□□□ -1.52
CiitaP79621 Gm43316-201ENSMUST00000197252 1295 ntBASIC5.54□□□□□ -1.52
CiitaP79621 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.54□□□□□ -1.52
CiitaP79621 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC5.54□□□□□ -1.52
CiitaP79621 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC5.54□□□□□ -1.52
CiitaP79621 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.54□□□□□ -1.52
CiitaP79621 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.54□□□□□ -1.52
CiitaP79621 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CiitaP79621 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CiitaP79621 Mir30b-201ENSMUST00000083542 96 ntBASIC5.54□□□□□ -1.52
CiitaP79621 Mir17-201ENSMUST00000083574 84 ntBASIC5.54□□□□□ -1.52
CiitaP79621 Gm25005-201ENSMUST00000083812 156 ntBASIC5.54□□□□□ -1.52
CiitaP79621 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CiitaP79621 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CiitaP79621 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CiitaP79621 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CiitaP79621 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.54□□□□□ -1.52
CiitaP79621 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.54□□□□□ -1.52
CiitaP79621 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CiitaP79621 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC5.54□□□□□ -1.52
CiitaP79621 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CiitaP79621 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CiitaP79621 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC5.53□□□□□ -1.52
CiitaP79621 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.53□□□□□ -1.52
CiitaP79621 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CiitaP79621 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CiitaP79621 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CiitaP79621 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.53□□□□□ -1.52
CiitaP79621 Gm25419-201ENSMUST00000104215 191 ntBASIC5.53□□□□□ -1.52
CiitaP79621 Gm24160-201ENSMUST00000104594 126 ntBASIC5.53□□□□□ -1.52
CiitaP79621 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CiitaP79621 Gm13755-201ENSMUST00000118509 305 ntBASIC5.53□□□□□ -1.52
CiitaP79621 Gm14985-201ENSMUST00000118693 786 ntBASIC5.53□□□□□ -1.52
CiitaP79621 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CiitaP79621 Gm25907-201ENSMUST00000158486 125 ntBASIC5.53□□□□□ -1.52
CiitaP79621 Gm27551-201ENSMUST00000184258 77 ntBASIC5.53□□□□□ -1.52
CiitaP79621 Gm27818-201ENSMUST00000184536 159 ntBASIC5.53□□□□□ -1.52
CiitaP79621 Gm37710-201ENSMUST00000193501 1274 ntBASIC5.53□□□□□ -1.52
CiitaP79621 Gm9442-201ENSMUST00000194242 319 ntBASIC5.53□□□□□ -1.52
CiitaP79621 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC5.53□□□□□ -1.52
CiitaP79621 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.53□□□□□ -1.52
CiitaP79621 Gm43631-201ENSMUST00000202011 369 ntBASIC5.53□□□□□ -1.52
CiitaP79621 Gm44548-201ENSMUST00000208929 192 ntBASIC5.53□□□□□ -1.52
CiitaP79621 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.53□□□□□ -1.52
CiitaP79621 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.53□□□□□ -1.52
CiitaP79621 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.53□□□□□ -1.52
CiitaP79621 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CiitaP79621 Gm24917-201ENSMUST00000083935 104 ntBASIC5.53□□□□□ -1.52
CiitaP79621 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CiitaP79621 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CiitaP79621 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CiitaP79621 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CiitaP79621 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CiitaP79621 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CiitaP79621 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CiitaP79621 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CiitaP79621 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CiitaP79621 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CiitaP79621 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CiitaP79621 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
CiitaP79621 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
CiitaP79621 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
CiitaP79621 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
CiitaP79621 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
CiitaP79621 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
CiitaP79621 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
CiitaP79621 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
CiitaP79621 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
CiitaP79621 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
CiitaP79621 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
CiitaP79621 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
CiitaP79621 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms