Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm12041-201ENSMUST00000121606 602 ntBASIC5.29□□□□□ -1.56
Tpm1P58771 Gm16259-201ENSMUST00000145241 553 ntBASIC5.29□□□□□ -1.56
Tpm1P58771 Gm24065-201ENSMUST00000157487 264 ntBASIC5.29□□□□□ -1.56
Tpm1P58771 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Tpm1P58771 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Tpm1P58771 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Tpm1P58771 Mir7046-201ENSMUST00000183435 66 ntBASIC5.29□□□□□ -1.56
Tpm1P58771 Gm29148-201ENSMUST00000188140 336 ntBASIC5.29□□□□□ -1.56
Tpm1P58771 Ighv6-2-201ENSMUST00000192430 295 ntBASIC5.29□□□□□ -1.56
Tpm1P58771 Gm18468-201ENSMUST00000207321 369 ntBASIC5.29□□□□□ -1.56
Tpm1P58771 Gm18470-201ENSMUST00000207467 420 ntBASIC5.29□□□□□ -1.56
Tpm1P58771 Gm18465-201ENSMUST00000207468 369 ntBASIC5.29□□□□□ -1.56
Tpm1P58771 Gm18464-201ENSMUST00000207803 420 ntBASIC5.29□□□□□ -1.56
Tpm1P58771 Gm18458-201ENSMUST00000207908 369 ntBASIC5.29□□□□□ -1.56
Tpm1P58771 Gm18461-201ENSMUST00000208421 420 ntBASIC5.29□□□□□ -1.56
Tpm1P58771 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Tpm1P58771 AC154313.1-201ENSMUST00000217755 3841 ntBASIC5.29□□□□□ -1.56
Tpm1P58771 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.29□□□□□ -1.56
Tpm1P58771 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Tpm1P58771 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Tpm1P58771 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.29□□□□□ -1.56
Tpm1P58771 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Tpm1P58771 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Tpm1P58771 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Tpm1P58771 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Tpm1P58771 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC5.29□□□□□ -1.56
Tpm1P58771 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Tpm1P58771 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Tpm1P58771 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Tpm1P58771 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Tpm1P58771 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC5.28□□□□□ -1.56
Tpm1P58771 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.28□□□□□ -1.56
Tpm1P58771 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Tpm1P58771 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Tpm1P58771 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.28□□□□□ -1.56
Tpm1P58771 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Tpm1P58771 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Tpm1P58771 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Tpm1P58771 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.28□□□□□ -1.56
Tpm1P58771 Mir1970-201ENSMUST00000157839 104 ntBASIC5.28□□□□□ -1.56
Tpm1P58771 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Tpm1P58771 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC5.28□□□□□ -1.56
Tpm1P58771 Gm24561-201ENSMUST00000175182 95 ntBASIC5.28□□□□□ -1.56
Tpm1P58771 Gm6055-201ENSMUST00000180532 378 ntBASIC5.28□□□□□ -1.56
Tpm1P58771 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Tpm1P58771 Mir7220-201ENSMUST00000183978 60 ntBASIC5.28□□□□□ -1.56
Tpm1P58771 Mir7687-201ENSMUST00000184722 59 ntBASIC5.28□□□□□ -1.56
Tpm1P58771 Gm29097-201ENSMUST00000190273 422 ntBASIC5.28□□□□□ -1.56
Tpm1P58771 Gm34176-201ENSMUST00000192621 474 ntBASIC5.28□□□□□ -1.56
Tpm1P58771 Gm37243-201ENSMUST00000193407 595 ntBASIC5.28□□□□□ -1.56
Tpm1P58771 Gm7721-201ENSMUST00000200446 546 ntBASIC5.28□□□□□ -1.56
Tpm1P58771 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
Tpm1P58771 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Tpm1P58771 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.28□□□□□ -1.56
Tpm1P58771 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Tpm1P58771 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Tpm1P58771 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.28□□□□□ -1.56
Tpm1P58771 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.28□□□□□ -1.56
Tpm1P58771 AV026068-231ENSMUST00000225862 482 ntBASIC5.28□□□□□ -1.56
Tpm1P58771 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Tpm1P58771 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Tpm1P58771 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Tpm1P58771 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Tpm1P58771 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Tpm1P58771 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Tpm1P58771 Gm28362-201ENSMUST00000189430 2420 ntBASIC5.28□□□□□ -1.56
Tpm1P58771 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Tpm1P58771 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Tpm1P58771 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Tpm1P58771 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Tpm1P58771 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Tpm1P58771 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Tpm1P58771 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Tpm1P58771 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Tpm1P58771 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Tpm1P58771 Gm42616-201ENSMUST00000198989 4184 ntBASIC5.27□□□□□ -1.57
Tpm1P58771 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.27□□□□□ -1.57
Tpm1P58771 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.27□□□□□ -1.57
Tpm1P58771 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Tpm1P58771 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Tpm1P58771 Gm23692-201ENSMUST00000101881 160 ntBASIC5.27□□□□□ -1.57
Tpm1P58771 Gm25419-201ENSMUST00000104215 191 ntBASIC5.27□□□□□ -1.57
Tpm1P58771 Gm23750-201ENSMUST00000104222 132 ntBASIC5.27□□□□□ -1.57
Tpm1P58771 Gm15745-201ENSMUST00000119807 115 ntBASIC5.27□□□□□ -1.57
Tpm1P58771 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.27□□□□□ -1.57
Tpm1P58771 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.27□□□□□ -1.57
Tpm1P58771 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Tpm1P58771 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC5.27□□□□□ -1.57
Tpm1P58771 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC5.27□□□□□ -1.57
Tpm1P58771 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC5.27□□□□□ -1.57
Tpm1P58771 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC5.27□□□□□ -1.57
Tpm1P58771 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.27□□□□□ -1.57
Tpm1P58771 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC5.27□□□□□ -1.57
Tpm1P58771 Gm19189-201ENSMUST00000221689 754 ntBASIC5.27□□□□□ -1.57
Tpm1P58771 AL671874.1-201ENSMUST00000223746 1123 ntBASIC5.27□□□□□ -1.57
Tpm1P58771 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Tpm1P58771 Gm6177-201ENSMUST00000085589 465 ntBASIC5.27□□□□□ -1.57
Tpm1P58771 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Tpm1P58771 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Tpm1P58771 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 102.1 ms