Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC5.41□□□□□ -1.54
NcanP55066 Gm23116-201ENSMUST00000158481 67 ntBASIC5.41□□□□□ -1.54
NcanP55066 Gm6673-201ENSMUST00000166114 700 ntBASIC5.41□□□□□ -1.54
NcanP55066 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NcanP55066 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC5.41□□□□□ -1.54
NcanP55066 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.41□□□□□ -1.54
NcanP55066 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC5.41□□□□□ -1.54
NcanP55066 Gm44237-201ENSMUST00000205183 936 ntBASIC5.41□□□□□ -1.54
NcanP55066 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.41□□□□□ -1.54
NcanP55066 Gm45523-201ENSMUST00000210712 799 ntBASIC5.41□□□□□ -1.54
NcanP55066 Gm19186-201ENSMUST00000219922 333 ntBASIC5.41□□□□□ -1.54
NcanP55066 Gm46998-201ENSMUST00000221444 330 ntBASIC5.41□□□□□ -1.54
NcanP55066 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.41□□□□□ -1.54
NcanP55066 Gm23464-201ENSMUST00000083145 147 ntBASIC5.41□□□□□ -1.54
NcanP55066 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NcanP55066 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NcanP55066 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NcanP55066 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NcanP55066 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.41□□□□□ -1.54
NcanP55066 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NcanP55066 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NcanP55066 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.41□□□□□ -1.54
NcanP55066 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NcanP55066 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
NcanP55066 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NcanP55066 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NcanP55066 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NcanP55066 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NcanP55066 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NcanP55066 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NcanP55066 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NcanP55066 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.4□□□□□ -1.54
NcanP55066 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
NcanP55066 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
NcanP55066 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NcanP55066 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NcanP55066 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.4□□□□□ -1.54
NcanP55066 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NcanP55066 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NcanP55066 Gm25376-201ENSMUST00000104340 133 ntBASIC5.4□□□□□ -1.54
NcanP55066 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.4□□□□□ -1.54
NcanP55066 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC5.4□□□□□ -1.54
NcanP55066 Gm14854-201ENSMUST00000117758 841 ntBASIC5.4□□□□□ -1.54
NcanP55066 Gm8430-201ENSMUST00000119780 471 ntBASIC5.4□□□□□ -1.54
NcanP55066 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC5.4□□□□□ -1.54
NcanP55066 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NcanP55066 Gm23865-201ENSMUST00000157723 97 ntBASIC5.4□□□□□ -1.54
NcanP55066 Gm15796-201ENSMUST00000162135 204 ntBASIC5.4□□□□□ -1.54
NcanP55066 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NcanP55066 Gm18183-201ENSMUST00000191024 615 ntBASIC5.4□□□□□ -1.54
NcanP55066 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC5.4□□□□□ -1.54
NcanP55066 Gm44214-201ENSMUST00000204153 606 ntBASIC5.4□□□□□ -1.54
NcanP55066 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NcanP55066 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NcanP55066 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.4□□□□□ -1.54
NcanP55066 Gm19885-201ENSMUST00000212853 343 ntBASIC5.4□□□□□ -1.54
NcanP55066 Gm7822-201ENSMUST00000222433 581 ntBASIC5.4□□□□□ -1.54
NcanP55066 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NcanP55066 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NcanP55066 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NcanP55066 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
NcanP55066 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
NcanP55066 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.4□□□□□ -1.55
NcanP55066 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
NcanP55066 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
NcanP55066 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
NcanP55066 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
NcanP55066 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
NcanP55066 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
NcanP55066 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
NcanP55066 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
NcanP55066 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
NcanP55066 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NcanP55066 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NcanP55066 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
NcanP55066 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NcanP55066 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NcanP55066 Gm44220-201ENSMUST00000203784 2487 ntBASIC5.39□□□□□ -1.55
NcanP55066 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
NcanP55066 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.39□□□□□ -1.55
NcanP55066 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NcanP55066 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
NcanP55066 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NcanP55066 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
NcanP55066 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NcanP55066 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
NcanP55066 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NcanP55066 Gm13363-201ENSMUST00000122008 522 ntBASIC5.39□□□□□ -1.55
NcanP55066 Gm15530-201ENSMUST00000122206 555 ntBASIC5.39□□□□□ -1.55
NcanP55066 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NcanP55066 Gm13092-201ENSMUST00000136346 260 ntBASIC5.39□□□□□ -1.55
NcanP55066 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
NcanP55066 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC5.39□□□□□ -1.55
NcanP55066 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
NcanP55066 Gm10292-202ENSMUST00000193165 585 ntBASIC5.39□□□□□ -1.55
NcanP55066 Gm7449-201ENSMUST00000194393 663 ntBASIC5.39□□□□□ -1.55
NcanP55066 Mir6516-201ENSMUST00000196236 110 ntBASIC5.39□□□□□ -1.55
NcanP55066 Gm18330-201ENSMUST00000199246 547 ntBASIC5.39□□□□□ -1.55
NcanP55066 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC5.39□□□□□ -1.55
NcanP55066 Gm45072-201ENSMUST00000208673 929 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms