Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC4.87□□□□□ -1.63
HttP42859 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HttP42859 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
HttP42859 Gm14711-201ENSMUST00000117056 217 ntBASIC4.87□□□□□ -1.63
HttP42859 Gm15426-201ENSMUST00000117823 556 ntBASIC4.87□□□□□ -1.63
HttP42859 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC4.87□□□□□ -1.63
HttP42859 Gm4725-201ENSMUST00000151048 587 ntBASIC4.87□□□□□ -1.63
HttP42859 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HttP42859 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HttP42859 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.87□□□□□ -1.63
HttP42859 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
HttP42859 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HttP42859 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC4.87□□□□□ -1.63
HttP42859 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.87□□□□□ -1.63
HttP42859 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HttP42859 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HttP42859 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HttP42859 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HttP42859 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HttP42859 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC4.87□□□□□ -1.63
HttP42859 Gm15783-201ENSMUST00000117521 633 ntBASIC4.87□□□□□ -1.63
HttP42859 Gm15885-201ENSMUST00000122114 388 ntBASIC4.87□□□□□ -1.63
HttP42859 Gm43044-201ENSMUST00000198091 379 ntBASIC4.87□□□□□ -1.63
HttP42859 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.87□□□□□ -1.63
HttP42859 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.87□□□□□ -1.63
HttP42859 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.87□□□□□ -1.63
HttP42859 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HttP42859 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HttP42859 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HttP42859 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HttP42859 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
HttP42859 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HttP42859 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HttP42859 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HttP42859 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HttP42859 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HttP42859 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HttP42859 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HttP42859 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HttP42859 Gm22115-201ENSMUST00000103976 133 ntBASIC4.86□□□□□ -1.63
HttP42859 Gm23923-201ENSMUST00000104108 133 ntBASIC4.86□□□□□ -1.63
HttP42859 Gm12335-201ENSMUST00000119738 327 ntBASIC4.86□□□□□ -1.63
HttP42859 Gm37603-201ENSMUST00000192368 219 ntBASIC4.86□□□□□ -1.63
HttP42859 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
HttP42859 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.86□□□□□ -1.63
HttP42859 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC4.86□□□□□ -1.63
HttP42859 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
HttP42859 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HttP42859 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
HttP42859 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC4.86□□□□□ -1.63
HttP42859 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HttP42859 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HttP42859 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HttP42859 Gm15916-201ENSMUST00000118355 736 ntBASIC4.86□□□□□ -1.63
HttP42859 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
HttP42859 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.86□□□□□ -1.63
HttP42859 Gm20549-201ENSMUST00000174804 429 ntBASIC4.86□□□□□ -1.63
HttP42859 Gm18426-201ENSMUST00000191874 973 ntBASIC4.86□□□□□ -1.63
HttP42859 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.86□□□□□ -1.63
HttP42859 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HttP42859 Gm7099-201ENSMUST00000080066 554 ntBASIC4.86□□□□□ -1.63
HttP42859 March6-201ENSMUST00000090227 6260 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HttP42859 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HttP42859 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HttP42859 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
HttP42859 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HttP42859 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
HttP42859 Gm26404-201ENSMUST00000158498 109 ntBASIC4.86□□□□□ -1.63
HttP42859 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HttP42859 Gm37791-201ENSMUST00000195081 286 ntBASIC4.86□□□□□ -1.63
HttP42859 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HttP42859 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC4.86□□□□□ -1.63
HttP42859 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HttP42859 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HttP42859 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HttP42859 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HttP42859 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HttP42859 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HttP42859 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HttP42859 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HttP42859 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HttP42859 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HttP42859 Gm38284-201ENSMUST00000194803 4539 ntBASIC4.85□□□□□ -1.63
HttP42859 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HttP42859 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HttP42859 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
HttP42859 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.85□□□□□ -1.63
HttP42859 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC4.85□□□□□ -1.63
HttP42859 Gm5265-201ENSMUST00000076828 342 ntBASIC4.85□□□□□ -1.63
HttP42859 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HttP42859 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HttP42859 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HttP42859 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HttP42859 AC137871.4-201ENSMUST00000226323 3901 ntBASIC4.85□□□□□ -1.63
HttP42859 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HttP42859 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HttP42859 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HttP42859 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HttP42859 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
HttP42859 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms