Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC5.92□□□□□ -1.46
Traf1P39428 Prl7a1-203ENSMUST00000224852 1283 ntBASIC5.92□□□□□ -1.46
Traf1P39428 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Traf1P39428 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Traf1P39428 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Traf1P39428 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.92□□□□□ -1.46
Traf1P39428 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.92□□□□□ -1.46
Traf1P39428 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
Traf1P39428 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Traf1P39428 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.92□□□□□ -1.46
Traf1P39428 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Traf1P39428 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
Traf1P39428 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Traf1P39428 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.91□□□□□ -1.46
Traf1P39428 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.91□□□□□ -1.46
Traf1P39428 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Traf1P39428 Gm38101-201ENSMUST00000193484 3557 ntBASIC5.91□□□□□ -1.46
Traf1P39428 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Traf1P39428 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.91□□□□□ -1.46
Traf1P39428 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Traf1P39428 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Traf1P39428 Gm24160-201ENSMUST00000104594 126 ntBASIC5.91□□□□□ -1.46
Traf1P39428 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Traf1P39428 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Traf1P39428 Gm14985-201ENSMUST00000118693 786 ntBASIC5.91□□□□□ -1.46
Traf1P39428 Gm13367-201ENSMUST00000119955 796 ntBASIC5.91□□□□□ -1.46
Traf1P39428 Gm9435-201ENSMUST00000120379 877 ntBASIC5.91□□□□□ -1.46
Traf1P39428 Gm12007-201ENSMUST00000120978 597 ntBASIC5.91□□□□□ -1.46
Traf1P39428 Gm15388-201ENSMUST00000121578 726 ntBASIC5.91□□□□□ -1.46
Traf1P39428 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Traf1P39428 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.91□□□□□ -1.46
Traf1P39428 Gm25432-201ENSMUST00000158284 66 ntBASIC5.91□□□□□ -1.46
Traf1P39428 Gm23700-201ENSMUST00000158842 102 ntBASIC5.91□□□□□ -1.46
Traf1P39428 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Traf1P39428 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.91□□□□□ -1.46
Traf1P39428 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC5.91□□□□□ -1.46
Traf1P39428 Gm20674-201ENSMUST00000177452 369 ntBASIC5.91□□□□□ -1.46
Traf1P39428 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Traf1P39428 Gm27266-201ENSMUST00000184521 123 ntBASIC5.91□□□□□ -1.46
Traf1P39428 Gm27492-201ENSMUST00000185194 187 ntBASIC5.91□□□□□ -1.46
Traf1P39428 Gm5058-201ENSMUST00000187331 463 ntBASIC5.91□□□□□ -1.46
Traf1P39428 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC5.91□□□□□ -1.46
Traf1P39428 Gm28769-201ENSMUST00000190176 615 ntBASIC5.91□□□□□ -1.46
Traf1P39428 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC5.91□□□□□ -1.46
Traf1P39428 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC5.91□□□□□ -1.46
Traf1P39428 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.91□□□□□ -1.46
Traf1P39428 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.91□□□□□ -1.46
Traf1P39428 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC5.91□□□□□ -1.46
Traf1P39428 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.91□□□□□ -1.46
Traf1P39428 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Traf1P39428 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Traf1P39428 Gm42455-201ENSMUST00000199761 2736 ntBASIC5.91□□□□□ -1.46
Traf1P39428 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Traf1P39428 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Traf1P39428 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Traf1P39428 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Traf1P39428 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.91□□□□□ -1.46
Traf1P39428 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Traf1P39428 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.9□□□□□ -1.46
Traf1P39428 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Traf1P39428 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.9□□□□□ -1.46
Traf1P39428 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.9□□□□□ -1.46
Traf1P39428 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.9□□□□□ -1.46
Traf1P39428 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.9□□□□□ -1.46
Traf1P39428 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.9□□□□□ -1.46
Traf1P39428 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.9□□□□□ -1.46
Traf1P39428 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.9□□□□□ -1.46
Traf1P39428 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.9□□□□□ -1.46
Traf1P39428 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.9□□□□□ -1.46
Traf1P39428 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.9□□□□□ -1.46
Traf1P39428 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
Traf1P39428 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.9□□□□□ -1.46
Traf1P39428 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.9□□□□□ -1.46
Traf1P39428 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Traf1P39428 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
Traf1P39428 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.9□□□□□ -1.46
Traf1P39428 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Traf1P39428 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
Traf1P39428 Gm11909-201ENSMUST00000121424 759 ntBASIC5.9□□□□□ -1.46
Traf1P39428 Gm12444-201ENSMUST00000121512 877 ntBASIC5.9□□□□□ -1.46
Traf1P39428 Gm25846-201ENSMUST00000158013 135 ntBASIC5.9□□□□□ -1.46
Traf1P39428 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC5.9□□□□□ -1.46
Traf1P39428 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Traf1P39428 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Traf1P39428 Gm23799-201ENSMUST00000175559 120 ntBASIC5.9□□□□□ -1.46
Traf1P39428 Gm18985-201ENSMUST00000196472 1079 ntBASIC5.9□□□□□ -1.46
Traf1P39428 Gm44604-201ENSMUST00000205475 496 ntBASIC5.9□□□□□ -1.46
Traf1P39428 Gm34272-201ENSMUST00000208886 253 ntBASIC5.9□□□□□ -1.46
Traf1P39428 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC5.9□□□□□ -1.46
Traf1P39428 Gm18924-201ENSMUST00000211929 316 ntBASIC5.9□□□□□ -1.46
Traf1P39428 Gm19095-201ENSMUST00000220533 730 ntBASIC5.9□□□□□ -1.46
Traf1P39428 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC5.9□□□□□ -1.46
Traf1P39428 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.9□□□□□ -1.46
Traf1P39428 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.9□□□□□ -1.46
Traf1P39428 Gm9512-201ENSMUST00000223112 497 ntBASIC5.9□□□□□ -1.46
Traf1P39428 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.9□□□□□ -1.46
Traf1P39428 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Traf1P39428 Snord59a-201ENSMUST00000082844 74 ntBASIC5.9□□□□□ -1.46
Traf1P39428 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Traf1P39428 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms