Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col18a1P39061 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Col18a1P39061 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Col18a1P39061 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
Col18a1P39061 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC7.01□□□□□ -1.29
Col18a1P39061 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Col18a1P39061 Gm9498-201ENSMUST00000140849 291 ntBASIC7.01□□□□□ -1.29
Col18a1P39061 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Col18a1P39061 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC7.01□□□□□ -1.29
Col18a1P39061 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Col18a1P39061 Gm5777-201ENSMUST00000177265 448 ntBASIC7.01□□□□□ -1.29
Col18a1P39061 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC7.01□□□□□ -1.29
Col18a1P39061 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC7.01□□□□□ -1.29
Col18a1P39061 Gm44232-201ENSMUST00000204537 225 ntBASIC7.01□□□□□ -1.29
Col18a1P39061 Gm45008-201ENSMUST00000206420 493 ntBASIC7.01□□□□□ -1.29
Col18a1P39061 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC7.01□□□□□ -1.29
Col18a1P39061 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC7.01□□□□□ -1.29
Col18a1P39061 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Col18a1P39061 AC132112.1-201ENSMUST00000226354 505 ntBASIC7.01□□□□□ -1.29
Col18a1P39061 Mecom-201ENSMUST00000061088 348 ntBASIC7.01□□□□□ -1.29
Col18a1P39061 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Col18a1P39061 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col18a1P39061 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col18a1P39061 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col18a1P39061 Gm38189-201ENSMUST00000194495 1457 ntBASIC7.01□□□□□ -1.29
Col18a1P39061 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col18a1P39061 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Col18a1P39061 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col18a1P39061 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col18a1P39061 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col18a1P39061 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
Col18a1P39061 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col18a1P39061 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC7□□□□□ -1.29
Col18a1P39061 Gm20789-201ENSMUST00000221002 4195 ntBASIC7□□□□□ -1.29
Col18a1P39061 Gm3931-201ENSMUST00000119038 455 ntBASIC7□□□□□ -1.29
Col18a1P39061 Gm13593-201ENSMUST00000121329 692 ntBASIC7□□□□□ -1.29
Col18a1P39061 Gm14623-201ENSMUST00000121398 603 ntBASIC7□□□□□ -1.29
Col18a1P39061 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC7□□□□□ -1.29
Col18a1P39061 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC7□□□□□ -1.29
Col18a1P39061 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC7□□□□□ -1.29
Col18a1P39061 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC7□□□□□ -1.29
Col18a1P39061 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC7□□□□□ -1.29
Col18a1P39061 Gm28428-201ENSMUST00000188886 697 ntBASIC7□□□□□ -1.29
Col18a1P39061 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC7□□□□□ -1.29
Col18a1P39061 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC7□□□□□ -1.29
Col18a1P39061 Gm18747-201ENSMUST00000198129 648 ntBASIC7□□□□□ -1.29
Col18a1P39061 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC7□□□□□ -1.29
Col18a1P39061 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC7□□□□□ -1.29
Col18a1P39061 Gm44277-201ENSMUST00000205128 649 ntBASIC7□□□□□ -1.29
Col18a1P39061 AC159819.1-201ENSMUST00000213911 328 ntBASIC7□□□□□ -1.29
Col18a1P39061 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC7□□□□□ -1.29
Col18a1P39061 AC121947.1-201ENSMUST00000221755 1145 ntBASIC7□□□□□ -1.29
Col18a1P39061 AC131033.2-201ENSMUST00000228138 1011 ntBASIC7□□□□□ -1.29
Col18a1P39061 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC7□□□□□ -1.29
Col18a1P39061 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC7□□□□□ -1.29
Col18a1P39061 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col18a1P39061 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col18a1P39061 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col18a1P39061 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC7□□□□□ -1.29
Col18a1P39061 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
Col18a1P39061 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col18a1P39061 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col18a1P39061 Gm14802-201ENSMUST00000121944 1885 ntBASIC7□□□□□ -1.29
Col18a1P39061 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC7□□□□□ -1.29
Col18a1P39061 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Col18a1P39061 Gm43784-201ENSMUST00000202922 2436 ntBASIC7□□□□□ -1.29
Col18a1P39061 Gm44144-201ENSMUST00000203683 1960 ntBASIC7□□□□□ -1.29
Col18a1P39061 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Col18a1P39061 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC7□□□□□ -1.29
Col18a1P39061 Gm44193-201ENSMUST00000204822 2523 ntBASIC7□□□□□ -1.29
Col18a1P39061 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col18a1P39061 Gm15772-201ENSMUST00000118533 438 ntBASIC7□□□□□ -1.29
Col18a1P39061 Gm11404-201ENSMUST00000120872 494 ntBASIC7□□□□□ -1.29
Col18a1P39061 Gm24735-201ENSMUST00000158859 118 ntBASIC7□□□□□ -1.29
Col18a1P39061 Gm23945-201ENSMUST00000179609 92 ntBASIC7□□□□□ -1.29
Col18a1P39061 Gm23186-201ENSMUST00000180078 107 ntBASIC7□□□□□ -1.29
Col18a1P39061 Gm26991-201ENSMUST00000180950 620 ntBASIC7□□□□□ -1.29
Col18a1P39061 Gm28113-201ENSMUST00000188280 229 ntBASIC7□□□□□ -1.29
Col18a1P39061 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC7□□□□□ -1.29
Col18a1P39061 Gm37771-201ENSMUST00000193121 265 ntBASIC7□□□□□ -1.29
Col18a1P39061 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col18a1P39061 Gm43580-201ENSMUST00000202892 284 ntBASIC7□□□□□ -1.29
Col18a1P39061 Gm7588-201ENSMUST00000216866 571 ntBASIC7□□□□□ -1.29
Col18a1P39061 AC107453.2-201ENSMUST00000227714 655 ntBASIC7□□□□□ -1.29
Col18a1P39061 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC7□□□□□ -1.29
Col18a1P39061 Olfr480-201ENSMUST00000071658 1029 ntBASIC7□□□□□ -1.29
Col18a1P39061 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC6.99□□□□□ -1.29
Col18a1P39061 Gm18163-201ENSMUST00000197877 1643 ntBASIC6.99□□□□□ -1.29
Col18a1P39061 AC162467.3-201ENSMUST00000219716 2172 ntBASIC6.99□□□□□ -1.29
Col18a1P39061 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col18a1P39061 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col18a1P39061 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC6.99□□□□□ -1.29
Col18a1P39061 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col18a1P39061 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.99□□□□□ -1.29
Col18a1P39061 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col18a1P39061 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Col18a1P39061 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC6.99□□□□□ -1.29
Col18a1P39061 AC170999.1-201ENSMUST00000226359 1585 ntBASIC6.99□□□□□ -1.29
Col18a1P39061 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.99□□□□□ -1.29
Col18a1P39061 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms